NAMESPACE

# Generated by roxygen2: do not edit by hand

export(clean_fluorochromes)
export(estimate_SI)
export(estimate_brightness)
export(estimate_gate)
export(estimate_spillover)
export(filter_plot)
export(find_cutoff_FMO)
export(find_cutoff_flowDensity)
export(find_plateau)
export(indicate_optimal_voltages)
export(indicate_optimal_voltages_single)
export(plot_brightness)
export(plot_voltrations)
export(prep_FCS)
export(theoretical_brightness)
import(shiny)
import(shinyFiles)
importFrom(Biobase,pData)
importFrom(FlowSOM,AggregateFlowFrames)
importFrom(PeacoQC,RemoveDoublets)
importFrom(PeacoQC,RemoveMargins)
importFrom(dplyr,`%>%`)
importFrom(flowCore,arcsinhTransform)
importFrom(flowCore,colnames)
importFrom(flowCore,compensate)
importFrom(flowCore,estimateLogicle)
importFrom(flowCore,exprs)
importFrom(flowCore,fr_append_cols)
importFrom(flowCore,getChannelMarker)
importFrom(flowCore,keyword)
importFrom(flowCore,nrow)
importFrom(flowCore,parameters)
importFrom(flowCore,read.FCS)
importFrom(flowCore,transform)
importFrom(flowCore,transformList)
importFrom(flowDensity,deGate)
importFrom(ggplot2,aes)
importFrom(ggplot2,element_text)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_segment)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,geom_violin)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,layer_scales)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_x_discrete)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_minimal)
importFrom(ggplot2,theme_void)
importFrom(ggplot2,xlab)
importFrom(ggplot2,xlim)
importFrom(ggplot2,ylab)
importFrom(ggplot2,ylim)
importFrom(methods,is)
importFrom(patchwork,plot_layout)
importFrom(readxl,read_xlsx)
importFrom(rlang,.data)
importFrom(stats,lm)
importFrom(stats,median)
importFrom(stats,quantile)
importFrom(stringr,str_trim)
importFrom(utils,capture.output)