KP.1.1+Orf1b:L2213F+S:N185del, F186I(114 seqs) #1509
Labels
Deletions/Truncations/Frameshifted
Lineage showing any deletions or stop codons or TRS changes.
Emerged in an undersampled area
Actual infection toll may be much larger than number of sequences suggest
FLiRT
FLiRT is an Acronym for S:R346T + S:F456L
S:185
S:186
S:1086
S:1104
To be proposed
Green light for proposal
Truncated Orf(3-10)
Usher
Issues with usher related problems
It seems that other than KP.1.1.1(S:K182N), other seqs on the Orf1b:L2213F branch of KP.1.1 have another NTD mutation set that usher doesn't display.
KP.1.1+C20104T(Orf1b:L2213F)+del22115_22117,T22118A(S:N185-, F186I)
GISAID query: T22926C,C7113T,T22118A
No. of seqs: 14(UK 4 Canada 1 India 1 Thailand 1 Ireland 1 USA 6(1 from South Africa 2 from Qatar))
First:EPI_ISL_19025542, 2024-2-11, Thailand
Latest: EPI_ISL_19038720, 2024-3-26, USA(GBW baseline)
Usher doesn't display both mutations @AngieHinrichs, I think it shall at least display S:F186I, reading frame issue?
usher
Top is KP.1.1.1, all others belong to this branch.
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