JN.1+S:F456L possible dead or designated branch

[DailyCovidCases]

From #1253
Branch 21: 85 seqs, last sample was on 22 June 2024
usher
Branch 36: 116 seqs, last sample was in June 2024:
usher
Branch 41: 16 seqs, last sample was on 22 June 2024
usher
Branch 48: 38 seqs, last smaple was on 24 May 2024
usher
Branch 58: 77 seqs, last sample was on 27 June 2024:
usher
Branch 73: 20 seqs, last sample was on 2 July 2024
usher
Branch 113: 9 seqs, last sample was on 6 May 2024
usher
Branch 51,57 and 62 are not monophyletic

[FedeGueli]

Br.21 already closed
Br.36 aka cov-lineages/pango-designation#2613 you can close it
Branch 41: already closed
Branch 48 already closed
Branch 58 you should rearrange the proposal to propose exclusively the FLiRT branch now 12 (query G16269A,C12781T,T22928C,G22599C) it is the fast you should do it urgently.
Branch 73 already closed
Branch 113 now closed.

[FedeGueli]

Did you denote it with * instead of [P]?

As i ve said the updating back to secondary repo is too time expensive especially when 456L is already over 90%

[DailyCovidCases]

Some branches
cov-lineages/pango-designation#2543
cov-lineages/pango-designation#2517
cov-lineages/pango-designation#2577
cov-lineages/pango-designation#2578
cov-lineages/pango-designation#2589
cov-lineages/pango-designation#2531
should be either designated or count as dead

[FedeGueli]

#1253 is closed and archived now.