Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Extend PyDESeq2 class to support arbitrary contrasts and designs #610

Open
grst opened this issue May 27, 2024 · 1 comment
Open

Extend PyDESeq2 class to support arbitrary contrasts and designs #610

grst opened this issue May 27, 2024 · 1 comment
Labels
enhancement New feature or request

Comments

@grst
Copy link
Collaborator

grst commented May 27, 2024

Description of feature

Blocked by owkin/PyDESeq2#213

See also https://github.com/theislab/pertpy/blob/2cc7ff77695cb616bb3ab207b5e506c0880aadb1/pertpy/tools/_differential_gene_expression/_pydeseq2.py#L62-L69

Migrated from scverse/multi-condition-comparisions#13
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
enhancement New feature or request
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@grst @SNOL2