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investigate taking stdin in sourmash sig submodule and/or load_signatures #1049

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ctb opened this issue Jun 26, 2020 · 0 comments · Fixed by #1059
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investigate taking stdin in sourmash sig submodule and/or load_signatures #1049

ctb opened this issue Jun 26, 2020 · 0 comments · Fixed by #1059

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@ctb
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ctb commented Jun 26, 2020

For reasons that I haven't chased down, commands like

cat tests/test-data/47.fa.sig | sourmash sig describe -

don't work. I'm not sure there's a real reason for this - it should work - so we should fix it!

It'd be nice if sig cat, sig split, etc. could take stdin in addition to filenames. A unified loading framework as suggested in #875 could also help with this.

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