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[BUG] SUSPICIOUSLY_LONG_EVENT_DESIGN or SUSPICIOUSLY_SHORT_EVENT_DESIGN #115

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jungheejung opened this issue Sep 18, 2024 · 1 comment

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@jungheejung
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Which module is this from?

func

What is the issue?

(Write your answer here.)

What was your expected behavior?

Some runs are shorter than expected.

  • Either keep a documentation of these files OR
  • delete entirely from file list

How can we reproduce this?

Check _bold.json and key value dcmmeta_shape

Any additional context?

Below are the files that are shorter or longer than expected. Code for reproducing this output: https://github.com/spatialtopology/spacetop-prep/blob/dd101fbe3aa230ff25ca63d73a63f0939a631782/spacetop_prep/datalad/identify_shorterTR.py

Files with shorter dcmmeta_shape:
sub-0001_ses-02_task-narratives_acq-mb8_run-01_bold.json (TR Value: 937)
sub-0001_ses-02_task-narratives_acq-mb8_run-02_bold.json (TR Value: 1059)
sub-0005_ses-04_task-fractional_acq-mb8_run-01_bold.json (TR Value: 5)
sub-0013_ses-04_task-fractional_acq-mb8_run-01_bold.json (TR Value: 1234)
sub-0055_ses-02_task-narratives_acq-mb8_run-04_bold.json (TR Value: 1126)
sub-0069_ses-02_task-narratives_acq-mb8_run-03_bold.json (TR Value: 652)

Files with longer dcmmeta_shape:
sub-0002_ses-04_task-fractional_acq-mb8_run-01_bold.json (TR Value: 1323)
sub-0003_ses-04_task-fractional_acq-mb8_run-01_bold.json (TR Value: 1323)
sub-0004_ses-04_task-fractional_acq-mb8_run-01_bold.json (TR Value: 1323)
sub-0008_ses-04_task-fractional_acq-mb8_run-01_bold.json (TR Value: 1323)
sub-0009_ses-04_task-fractional_acq-mb8_run-01_bold.json (TR Value: 1323)
sub-0010_ses-04_task-fractional_acq-mb8_run-01_bold.json (TR Value: 1323)
sub-0011_ses-04_task-fractional_acq-mb8_run-01_bold.json (TR Value: 1323)
sub-0016_ses-04_task-fractional_acq-mb8_run-01_bold.json (TR Value: 1323)

sub-0017_ses-04_task-fractional_acq-mb8_run-01_bold.json (TR Value: 1323)

@jungheejung jungheejung mentioned this issue Sep 18, 2024
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@jungheejung jungheejung changed the title [BUG] [BUG] SUSPICIOUSLY_LONG_EVENT_DESIGN or SUSPICIOUSLY_SHORT_EVENT_DESIGN Sep 18, 2024
@jungheejung
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nib-ls sub-0004/ses-02/func/sub-0004_ses-02_task-faces_run-01*bold*.nii.gz

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