CITATION.cff

# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "biorecap" in publications use:'
type: software
license: MIT
title: 'biorecap: Retrieve and summarize bioRxiv preprints with a local LLM using
  ollama'
version: 0.1.0
abstract: Retrieve and summarize bioRxiv preprints with a local LLM using ollama.
authors:
- family-names: Turner
  given-names: Stephen
  email: vustephen@gmail.com
  orcid: https://orcid.org/0000-0001-9140-9028
repository-code: https://github.com/stephenturner/biorecap
url: https://stephenturner.github.io/biorecap/
contact:
- family-names: Turner
  given-names: Stephen
  email: vustephen@gmail.com
  orcid: https://orcid.org/0000-0001-9140-9028
references:
- type: software
  title: 'R: A Language and Environment for Statistical Computing'
  notes: Depends
  url: https://www.R-project.org/
  authors:
  - name: R Core Team
  institution:
    name: R Foundation for Statistical Computing
    address: Vienna, Austria
  year: '2024'
  version: '>= 4.2.0'
- type: software
  title: dplyr
  abstract: 'dplyr: A Grammar of Data Manipulation'
  notes: Imports
  url: https://dplyr.tidyverse.org
  repository: https://CRAN.R-project.org/package=dplyr
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
    orcid: https://orcid.org/0000-0003-4757-117X
  - family-names: François
    given-names: Romain
    orcid: https://orcid.org/0000-0002-2444-4226
  - family-names: Henry
    given-names: Lionel
  - family-names: Müller
    given-names: Kirill
    orcid: https://orcid.org/0000-0002-1416-3412
  - family-names: Vaughan
    given-names: Davis
    email: davis@posit.co
    orcid: https://orcid.org/0000-0003-4777-038X
  year: '2024'
  doi: 10.32614/CRAN.package.dplyr
- type: software
  title: ollamar
  abstract: 'ollamar: ''Ollama'' Language Models'
  notes: Imports
  url: https://hauselin.github.io/ollama-r/
  repository: https://CRAN.R-project.org/package=ollamar
  authors:
  - family-names: Lin
    given-names: Hause
    email: hauselin@gmail.com
    orcid: https://orcid.org/0000-0003-4590-7039
  year: '2024'
  doi: 10.32614/CRAN.package.ollamar
- type: software
  title: rlang
  abstract: 'rlang: Functions for Base Types and Core R and ''Tidyverse'' Features'
  notes: Imports
  url: https://rlang.r-lib.org
  repository: https://CRAN.R-project.org/package=rlang
  authors:
  - family-names: Henry
    given-names: Lionel
    email: lionel@posit.co
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
  year: '2024'
  doi: 10.32614/CRAN.package.rlang
- type: software
  title: rmarkdown
  abstract: 'rmarkdown: Dynamic Documents for R'
  notes: Imports
  url: https://pkgs.rstudio.com/rmarkdown/
  repository: https://CRAN.R-project.org/package=rmarkdown
  authors:
  - family-names: Allaire
    given-names: JJ
    email: jj@posit.co
  - family-names: Xie
    given-names: Yihui
    email: xie@yihui.name
    orcid: https://orcid.org/0000-0003-0645-5666
  - family-names: Dervieux
    given-names: Christophe
    email: cderv@posit.co
    orcid: https://orcid.org/0000-0003-4474-2498
  - family-names: McPherson
    given-names: Jonathan
    email: jonathan@posit.co
  - family-names: Luraschi
    given-names: Javier
  - family-names: Ushey
    given-names: Kevin
    email: kevin@posit.co
  - family-names: Atkins
    given-names: Aron
    email: aron@posit.co
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
  - family-names: Cheng
    given-names: Joe
    email: joe@posit.co
  - family-names: Chang
    given-names: Winston
    email: winston@posit.co
  - family-names: Iannone
    given-names: Richard
    email: rich@posit.co
    orcid: https://orcid.org/0000-0003-3925-190X
  year: '2024'
  doi: 10.32614/CRAN.package.rmarkdown
- type: software
  title: tidyRSS
  abstract: 'tidyRSS: Tidy RSS for R'
  notes: Imports
  url: https://github.com/RobertMyles/tidyrss
  repository: https://CRAN.R-project.org/package=tidyRSS
  authors:
  - family-names: McDonnell
    given-names: Robert Myles
    email: robertmylesmcdonnell@gmail.com
  year: '2024'
  doi: 10.32614/CRAN.package.tidyRSS
- type: software
  title: tinytable
  abstract: 'tinytable: Simple and Configurable Tables in ''HTML'', ''LaTeX'', ''Markdown'',
    ''Word'', ''PNG'', ''PDF'', and ''Typst'' Formats'
  notes: Imports
  url: https://vincentarelbundock.github.io/tinytable/
  repository: https://CRAN.R-project.org/package=tinytable
  authors:
  - family-names: Arel-Bundock
    given-names: Vincent
    email: vincent.arel-bundock@umontreal.ca
    orcid: https://orcid.org/0000-0003-2042-7063
  year: '2024'
  doi: 10.32614/CRAN.package.tinytable
- type: software
  title: knitr
  abstract: 'knitr: A General-Purpose Package for Dynamic Report Generation in R'
  notes: Suggests
  url: https://yihui.org/knitr/
  repository: https://CRAN.R-project.org/package=knitr
  authors:
  - family-names: Xie
    given-names: Yihui
    email: xie@yihui.name
    orcid: https://orcid.org/0000-0003-0645-5666
  year: '2024'
  doi: 10.32614/CRAN.package.knitr
- type: software
  title: markdown
  abstract: 'markdown: Render Markdown with ''commonmark'''
  notes: Suggests
  url: https://github.com/rstudio/markdown
  repository: https://CRAN.R-project.org/package=markdown
  authors:
  - family-names: Xie
    given-names: Yihui
    email: xie@yihui.name
    orcid: https://orcid.org/0000-0003-0645-5666
  - family-names: Allaire
    given-names: JJ
  - family-names: Horner
    given-names: Jeffrey
  year: '2024'
  doi: 10.32614/CRAN.package.markdown