issues with creating campa.ini with campa setup commandline

[kangsan422]

Dear Developers,

I am using a lab cluster (cpu) to test CAMPA out.

It appears that /home/bkang/.config/ directory does not exist. Please help!

[hspitzer]

@kangsan422 thanks for checking CAMPA out and reporting this error. There was a bug in the code which prevented the campa config file from being created when ~/.config does not exist. I have pushed a fix to develop, and will include this in a new release in the next days.

If you install CAMPA from the develop branch (pip install git+https://github.com/theislab/campa.git@develop), you should be able to check this code out.
FYI, if you are calling campa setup from inside a Jupyer notebook, I'd recommend to include --quiet flag (! campa setup --quiet), because otherwise the script will ask you for Keyboard Input which I believe does not work within Jupyter.
You can also setup paths directly from within python: https://campa.readthedocs.io/en/latest/notebooks/setup.html