test-and-build-docs.yml

name: Build test and documentation page

on:
  push:
    branches: [ master ]
  pull_request:
    branches: [ master ]

jobs:

  test:
    runs-on: ubuntu-latest
    steps:
    - uses: actions/checkout@v4
      with:
        fetch-depth: 0
        ref: ${{ github.event.pull_request.head.ref }}
        repository: ${{ github.event.pull_request.head.repo.full_name }}
    - name: Set up Python
      uses: actions/setup-python@v5
      with:
        python-version: 3.11
    - name: Install package and dependencies
      run: |
        pip install -U pip
        pip install .[tests]
    - name: Verify pubmed_parser installation
      run: |
        python -c "import pubmed_parser; print(f'pubmed_parser version: {pubmed_parser.__version__}')"
    - name: Run tests
      run: pytest --cov=pubmed_parser tests/ --verbose
    - name: Upload coverage to Codecov
      uses: codecov/codecov-action@v4

  docs:
    runs-on: ubuntu-latest
    steps:
    - uses: actions/checkout@v4
      with:
          fetch-depth: 0
          ref: ${{ github.event.pull_request.head.ref || github.ref }}
          repository: ${{ github.event.pull_request.head.repo.full_name || github.repository }}
    - name: Set up Python
      uses: actions/setup-python@v5
      with:
        python-version: 3.11
    - name: Install package and dependencies
      run: |
        pip install -U pip
        pip install -e .[docs]
    - name: Verify pubmed_parser installation
      run: |
        python -c "import pubmed_parser; print(f'pubmed_parser version: {pubmed_parser.__version__}')"
    - name: Build documentation
      run: |
        cd docs
        make html
        touch _build/html/.nojekyll
    - name: Deploy to GitHub Pages
      uses: peaceiris/actions-gh-pages@v4
      with:
        github_token: ${{ secrets.GITHUB_TOKEN }}
        publish_dir: docs/_build/html/
        keep_files: true