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test-cases.yaml
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test-cases.yaml
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# TODO: generate this _instead_ of "params_fillable.yaml" and then edit it
test1:
name: Test 1
description: "Test case for subject-tracking"
params:
# Parameters for 'Set Groupers' using task `set_groupers`.
groupers:
groupers: # (list[ecoscope_workflows.tasks.groupby._groupby.Grouper], FieldInfo(annotation=NoneType, required=True, description=' Index(es) and/or column(s) to group by, along with\n optional display names and help text.\n '))
- index_name: "month"
display_name: "Month"
help_text: "The month in which the patrol began or the event was updated."
# Parameters for 'Get Subject Group Observations from EarthRanger' using task `get_subjectgroup_observations`.
subject_obs:
client: "mep_dev" # (<class 'ecoscope_workflows.connections.EarthRangerClientProtocol'>, BeforeValidator(func=<bound method DataConnection.client_from_named_connection of <class 'ecoscope_workflows.connections.EarthRangerConnection'>>), WithJsonSchema(json_schema={'type': 'string', 'description': 'A named EarthRanger connection.'}, mode=None))
subject_group_name: "Elephants" # (<class 'str'>, FieldInfo(annotation=NoneType, required=True, description='Name of EarthRanger Subject'))
since: "2011-01-01T00:00:00Z" # (<class 'datetime.datetime'>, FieldInfo(annotation=NoneType, required=True, description='Start date'))
until: "2023-01-01T00:00:00Z" # (<class 'datetime.datetime'>, FieldInfo(annotation=NoneType, required=True, description='End date'))
include_inactive: False # (<class 'bool'>, FieldInfo(annotation=NoneType, required=True, description='Whether or not to include inactive subjects'))
# Parameters for 'Transform Observations to Relocations' using task `process_relocations`.
subject_reloc:
filter_point_coords:
- x: 180.0
y: 90.0
- x: 0.0
y: 0.0
relocs_columns: ["groupby_col", "fixtime", "junk_status", "geometry"] # (list[str], FieldInfo(annotation=NoneType, required=True))
# Parameters for 'Transform Relocations to Trajectories' using task `relocations_to_trajectory`.
subject_traj:
min_length_meters: 0.001 # (<class 'float'>, FieldInfo(annotation=NoneType, required=True))
max_length_meters: 10000 # (<class 'float'>, FieldInfo(annotation=NoneType, required=True))
max_time_secs: 3600 # (<class 'float'>, FieldInfo(annotation=NoneType, required=True))
min_time_secs: 1 # (<class 'float'>, FieldInfo(annotation=NoneType, required=True))
max_speed_kmhr: 120 # (<class 'float'>, FieldInfo(annotation=NoneType, required=True))
min_speed_kmhr: 0.0 # (<class 'float'>, FieldInfo(annotation=NoneType, required=True))
# Parameters for 'Add temporal index to Subject Trajectories' using task `add_temporal_index`.
traj_add_temporal_index:
index_name: "month" # (<class 'str'>, FieldInfo(annotation=NoneType, required=True, description='A name for the new index which will be added.'))
time_col: "segment_start" # (<class 'str'>, FieldInfo(annotation=NoneType, required=True, description='Name of existing column containing time data.'))
directive: "%B" # (typing.Literal['%a', '%A', '%b', '%B', '%c', '%d', '%f', '%H', '%I', '%j', '%m', '%M', '%p', '%S', '%U', '%w', '%W', '%x', '%X', '%y', '%Y', '%z', '%%'], FieldInfo(annotation=NoneType, required=True, description='A directive for formatting the time data.'))
# Parameters for 'Split Subject Trajectories by Group' using task `split_groups`.
split_subject_traj_groups: {}
# Parameters for 'Create map layer for each trajectory group' using task `create_map_layer`.
traj_map_layers:
layer_style:
layer_type: "polyline"
# Parameters for 'Draw Ecomaps for each trajectory group' using task `draw_ecomap`.
traj_ecomap:
tile_layer: "OpenStreetMap" # (str, FieldInfo(annotation=NoneType, required=False))
static: False # (<class 'bool'>, FieldInfo(annotation=NoneType, required=False))
title: "Subject Group Trajectory Map" # (<class 'str'>, FieldInfo(annotation=NoneType, required=False))
# Parameters for 'Persist ecomap as Text' using task `persist_text`.
ecomap_html_urls: {}
# Parameters for 'Create Map Widgets for Patrol Events' using task `create_map_widget_single_view`.
traj_map_widgets_single_views:
title: "Subject Group Trajectory Map" # (<class 'str'>, FieldInfo(annotation=NoneType, required=True, description='The title of the widget'))
# Parameters for 'Merge EcoMap Widget Views' using task `merge_widget_views`.
traj_grouped_map_widget: {}
# Parameters for 'Calculate Mean Speed Per Group' using task `dataframe_column_mean`.
mean_speed:
column_name: "speed_kmhr" # (<class 'str'>, FieldInfo(annotation=NoneType, required=True, description='Column to aggregate'))
# Parameters for 'Create Single Value Widgets for Mean Speed Per Group' using task `create_single_value_widget_single_view`.
mean_speed_sv_widgets:
title: "Mean Speed" # (<class 'str'>, FieldInfo(annotation=NoneType, required=True, description='The title of the widget'))
# Parameters for 'Merge per group Mean Speed SV widgets' using task `merge_widget_views`.
mean_speed_grouped_sv_widget: {}
# Parameters for 'Calculate Max Speed Per Group' using task `dataframe_column_mean`.
max_speed:
column_name: "speed_kmhr" # (<class 'str'>, FieldInfo(annotation=NoneType, required=True, description='Column to aggregate'))
# Parameters for 'Create Single Value Widgets for Mean Max Per Group' using task `create_single_value_widget_single_view`.
max_speed_sv_widgets:
title: "Max Speed" # (<class 'str'>, FieldInfo(annotation=NoneType, required=True, description='The title of the widget'))
# Parameters for 'Merge per group Total Patrols SV widgets' using task `merge_widget_views`.
max_speed_grouped_sv_widget: {}
# Parameters for 'Calculate Number of Locations Per Group' using task `dataframe_count`.
num_location: {}
# Parameters for 'Create Single Value Widgets for Number of Location Per Group' using task `create_single_value_widget_single_view`.
num_location_sv_widgets:
title: "Number of Locations" # (<class 'str'>, FieldInfo(annotation=NoneType, required=True, description='The title of the widget'))
# Parameters for 'Merge per group Number of Locations SV widgets' using task `merge_widget_views`.
num_location_grouped_sv_widget: {}
# Parameters for 'Calculate Day/Night Ratio Per Group' using task `get_day_night_ratio`.
daynight_ratio: {}
# Parameters for 'Create Single Value Widgets for Day/Night Ratio Per Group' using task `create_single_value_widget_single_view`.
daynight_ratio_sv_widgets:
title: "Day Night Ratio" # (<class 'str'>, FieldInfo(annotation=NoneType, required=True, description='The title of the widget'))
# Parameters for 'Merge per group Day/Night Ratio SV widgets' using task `merge_widget_views`.
daynight_ratio_grouped_sv_widget: {}
# Parameters for 'Calculate Time Density from Trajectory' using task `calculate_time_density`.
td:
pixel_size: 250.0 # (<class 'float'>, FieldInfo(annotation=NoneType, required=False, default=250.0, description='Pixel size for raster profile.'))
crs: "ESRI:102022" # (<class 'str'>, FieldInfo(annotation=NoneType, required=False, default='ESRI:102022'))
nodata_value: -9999 # (<class 'float'>, FieldInfo(annotation=NoneType, required=False, default=nan, metadata=[_PydanticGeneralMetadata(allow_inf_nan=True)]))
band_count: 1 # (<class 'int'>, FieldInfo(annotation=NoneType, required=False, default=1))
max_speed_factor: 1.05 # (<class 'float'>, FieldInfo(annotation=NoneType, required=False, default=1.05))
expansion_factor: 1.3 # (<class 'float'>, FieldInfo(annotation=NoneType, required=False, default=1.3))
percentiles: [50.0, 60.0, 70.0, 80.0, 90.0, 95.0] # (list[float], FieldInfo(annotation=NoneType, required=False, default=[50.0, 60.0, 70.0, 80.0, 90.0, 95.0]))
# Parameters for 'Create map layer from Time Density' using task `create_map_layer`.
td_map_layer:
layer_style:
layer_type: "polygon"
# Parameters for 'Draw Ecomap from Time Density' using task `draw_ecomap`.
td_ecomap:
tile_layer: OpenStreetMap # (str, FieldInfo(annotation=NoneType, required=False))
static: False # (<class 'bool'>, FieldInfo(annotation=NoneType, required=False))
title: "Great Map" # (<class 'str'>, FieldInfo(annotation=NoneType, required=False))
# Parameters for 'Persist Ecomap as Text' using task `persist_text`.
td_ecomap_html_url: {}
# Parameters for 'Create Time Density Map Widget' using task `create_map_widget_single_view`.
td_map_widget:
title: "Home Range Map" # (<class 'str'>, FieldInfo(annotation=NoneType, required=True, description='The title of the widget'))
# Parameters for 'Merge Time Density Map Widget Views' using task `merge_widget_views`.
td_grouped_map_widget: {}
# Parameters for 'Create Dashboard with Subject Tracking Widgets' using task `gather_dashboard`.
subject_tracking_dashboard:
title: "Subject Tracking Dashboard" # (<class 'str'>, FieldInfo(annotation=NoneType, required=True, description='The title of the dashboard'))
description: "A dashboard for visualizing subject trajectories and home range." # (<class 'str'>, FieldInfo(annotation=NoneType, required=True, description='The description of the dashboard'))
assertions:
result_stdout_contains:
- "A dashboard for visualizing subject trajectories and home range."
- "widget_type='map', title='Subject Group Trajectory Map'"
- "widget_type='single_value', title='Mean Speed'"
- "widget_type='single_value', title='Max Speed',"
- "widget_type='single_value', title='Number of Locations'"
- "widget_type='map', title='Home Range Map'"