-
Notifications
You must be signed in to change notification settings - Fork 18
141 lines (128 loc) · 3.98 KB
/
ci-additional.yaml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
name: CI Additional
on:
push:
branches:
- "main"
pull_request:
branches:
- "*"
workflow_dispatch: # allows you to trigger manually
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
detect-ci-trigger:
name: detect ci trigger
runs-on: ubuntu-latest
if: |
github.repository == 'xarray-contrib/flox'
&& (github.event_name == 'push' || github.event_name == 'pull_request')
outputs:
triggered: ${{ steps.detect-trigger.outputs.trigger-found }}
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 2
- uses: xarray-contrib/[email protected]
id: detect-trigger
with:
keyword: "[skip-ci]"
doctest:
name: Doctests
runs-on: "ubuntu-latest"
needs: detect-ci-trigger
if: needs.detect-ci-trigger.outputs.triggered == 'false'
defaults:
run:
shell: bash -l {0}
env:
CONDA_ENV_FILE: ci/environment.yml
PYTHON_VERSION: "3.12"
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0 # Fetch all history for all branches and tags.
- name: set environment variables
run: |
echo "TODAY=$(date +'%Y-%m-%d')" >> $GITHUB_ENV
- name: Setup micromamba
uses: mamba-org/setup-micromamba@v2
with:
environment-file: ${{env.CONDA_ENV_FILE}}
environment-name: flox-tests
init-shell: bash
cache-environment: true
cache-environment-key: "${{runner.os}}-${{runner.arch}}-py${{env.PYTHON_VERSION}}-${{env.TODAY}}-${{hashFiles(env.CONDA_ENV_FILE)}}"
create-args: |
python=${{ env.PYTHON_VERSION }}
- name: Install flox
run: |
python -m pip install --no-deps -e .
- name: Version info
run: |
conda info -a
conda list
- name: Run doctests
run: |
python -m pytest --doctest-modules \
flox/aggregations.py flox/core.py flox/xarray.py \
--ignore flox/tests \
--cov=./ --cov-report=xml
- name: Upload code coverage to Codecov
uses: codecov/[email protected]
with:
file: ./coverage.xml
flags: unittests
env_vars: RUNNER_OS
name: codecov-umbrella
fail_ci_if_error: false
mypy:
name: Mypy
runs-on: "ubuntu-latest"
needs: detect-ci-trigger
if: needs.detect-ci-trigger.outputs.triggered == 'false'
defaults:
run:
shell: bash -l {0}
env:
CONDA_ENV_FILE: ci/environment.yml
PYTHON_VERSION: "3.12"
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0 # Fetch all history for all branches and tags.
- name: set environment variables
run: |
echo "TODAY=$(date +'%Y-%m-%d')" >> $GITHUB_ENV
- name: Setup micromamba
uses: mamba-org/setup-micromamba@v2
with:
environment-file: ${{env.CONDA_ENV_FILE}}
environment-name: flox-tests
init-shell: bash
cache-environment: true
cache-environment-key: "${{runner.os}}-${{runner.arch}}-py${{env.PYTHON_VERSION}}-${{env.TODAY}}-${{hashFiles(env.CONDA_ENV_FILE)}}"
create-args: |
python=${{ env.PYTHON_VERSION }}
- name: Install flox
run: |
python -m pip install --no-deps -e .
- name: Version info
run: |
conda info -a
conda list
- name: Install mypy
run: |
python -m pip install mypy
- name: Run mypy
run: |
mkdir .mypy_cache
python -m mypy --install-types --non-interactive --cache-dir=.mypy_cache/ --cobertura-xml-report mypy_report
- name: Upload mypy coverage to Codecov
uses: codecov/[email protected]
with:
file: mypy_report/cobertura.xml
flags: mypy
env_vars: PYTHON_VERSION
name: codecov-umbrella
fail_ci_if_error: false