compounds.yaml

- id: 10fthf
  name: 10-Formyltetrahydrofolate
  formula: C20H21N7O7
  formula_neutral: C20H21N7O7
  charge: -2
  kegg: C00234
  cas: 692-29-5
- id: 12dgr_CN
  name: 1,2-Diacylglycerol (Cyanothece)
  formula: C1824H3314O250
  formula_neutral: C1824H3314O250
  charge: 0
- id: 13dpg
  name: 3-Phospho-D-glyceroyl phosphate
  formula: C3H4O10P2
  formula_neutral: C3H4O10P2
  charge: -4
  kegg: C00236
- id: 14glun
  name: 1,4-alpha-D-Glucan
  formula: C6H10O5
  formula_neutral: C6H10O5
  charge: 0
  kegg: C00277
- id: 15dap
  name: 1,5-Diaminopentane
  formula: C5H16N2
  formula_neutral: C5H16N2
  charge: 2
  kegg: C01672
  cas: 462-94-2
- id: 1ag3p_CN
  name: 1-Acyl-sn-glycerol 3-phosphate (Cyanothece)
  formula: C987H1807O350P50
  formula_neutral: C987H1807O350P50
  charge: -100
- id: 1ap2ol
  name: 1-Aminopropan-2-ol
  formula: C3H10NO
  formula_neutral: C3H10NO
  charge: 1
  kegg: C05771
  cas: 1867-62-5
- id: 1ap2olp
  name: D-1-Aminopropan-2-ol O-phosphate
  formula: C3H9NO4P
  formula_neutral: C3H9NO4P
  charge: -1
  kegg: C04122
  cas: 483-34-1
- id: 1p3h5c
  name: L-1-Pyrroline-3-hydroxy-5-carboxylate
  formula: C5H6NO3
  formula_neutral: C5H6NO3
  charge: -1
  kegg: C04281
  cas: 5255-75-4
- id: 1pyr5c
  name: 1-Pyrroline-5-carboxylate
  formula: C5H6NO2
  formula_neutral: C5H6NO2
  charge: -1
  kegg: C03912
- id: 22hop
  name: 22-Hopanol
  formula: C30H52O
  formula_neutral: C30H52O
  charge: 0
  kegg: C06309
  cas: 7440-38-2
- id: 23dhdp
  name: 2,3-Dihydrodipicolinate
  formula: C7H5NO4
  formula_neutral: C7H5NO4
  charge: -2
  kegg: C03340
- id: 23dhmb
  name: (R)-2,3-Dihydroxy-3-methylbutanoate
  formula: C5H9O4
  formula_neutral: C5H9O4
  charge: -1
  kegg: C04272
- id: 23dhmp
  name: (R)-2,3-Dihydroxy-3-methylpentanoate
  formula: C6H11O4
  formula_neutral: C6H11O4
  charge: -1
  kegg: C06007
- id: 25aics
  name: (S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate
  formula: C13H15N4O12P
  formula_neutral: C13H15N4O12P
  charge: -4
  kegg: C04823
- id: 25dhpp
  name: 2,5-Diamino-6-hydroxy-4-(5'-phosphoribosylamino)-pyrimidine
  formula: C9H14N5O8P
  formula_neutral: C9H14N5O8P
  charge: -2
  kegg: C01304
- id: 26dap-LL
  name: LL-2,6-Diaminoheptanedioate
  formula: C7H14N2O4
  formula_neutral: C7H14N2O4
  charge: 0
  kegg: C00666
  cas: 583-93-7
- id: 26dap-M
  name: meso-2,6-Diaminoheptanedioate
  formula: C7H14N2O4
  formula_neutral: C7H14N2O4
  charge: 0
  kegg: C00680
- id: 2ahbut
  name: (S)-2-Aceto-2-hydroxybutanoate
  formula: C6H9O4
  formula_neutral: C6H9O4
  charge: -1
  kegg: C06006
- id: 2ahhmd
  name: 2-Amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate
  formula: C7H8N5O8P2
  formula_neutral: C7H8N5O8P2
  charge: -3
  kegg: C04807
  cas: 70608-72-9
- id: 2ahhmp
  name: 2-Amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine
  formula: C7H9N5O2
  formula_neutral: C7H9N5O2
  charge: 0
  kegg: C01300
- id: 2aobut
  name: L-2-Amino-3-oxobutanoate
  formula: C4H7NO3
  formula_neutral: C4H7NO3
  charge: 0
  kegg: C03508
- id: 2beacp
  name: But-2-enoyl-[acyl-carrier protein]
  formula: C4H5OX
  formula_neutral: C4H5OX
  charge: 0
  kegg: C04246
  cas: 128-33-6
- id: 2cpr5p
  name: 1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate
  formula: C12H13NO9P
  formula_neutral: C12H13NO9P
  charge: -3
  kegg: C01302
- id: 2dda7p
  name: 2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate
  formula: C7H10O10P
  formula_neutral: C7H10O10P
  charge: -3
  kegg: C04691
- id: 2ddg6p
  name: 2-Dehydro-3-deoxy-D-gluconate 6-phosphate
  formula: C6H8O9P
  formula_neutral: C6H8O9P
  charge: -3
  kegg: C04442
- id: 2dhp
  name: 2-Dehydropantoate
  formula: C6H9O4
  formula_neutral: C6H9O4
  charge: -1
  kegg: C00966
- id: 2dr5p
  name: 2-Deoxy-D-ribose 5-phosphate
  formula: C5H9O7P
  formula_neutral: C5H9O7P
  charge: -2
  kegg: C00673
  cas: 102916-66-5
- id: 2h3opp
  name: 2-Hydroxy-3-oxopropanoate
  formula: C3H3O4
  formula_neutral: C3H3O4
  charge: -1
  kegg: C01146
- id: 2hbut
  name: 2-Hydroxybutyrate
  formula: C4H7O3
  formula_neutral: C4H7O3
  charge: -1
  kegg: C05984
  cas: 71-23-8
- id: 2ippm
  name: 2-Isopropylmaleate
  formula: C7H8O4
  formula_neutral: C7H8O4
  charge: -2
  kegg: C02631
- id: 2mahmp
  name: 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate
  formula: C6H8N3O7P2
  formula_neutral: C6H8N3O7P2
  charge: -3
  kegg: C04752
  cas: 745-65-3
- id: 2me4p
  name: 2-C-methyl-D-erythritol 4-phosphate
  formula: C5H11O7P
  formula_neutral: C5H11O7P
  charge: -2
  kegg: C11434
- id: 2mecdp
  name: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
  formula: C5H10O9P2
  formula_neutral: C5H10O9P2
  charge: -2
  kegg: C11453
- id: 2obut
  name: 2-Oxobutanoate
  formula: C4H5O3
  formula_neutral: C4H5O3
  charge: -1
  kegg: C00109
  cas: 600-18-0
- id: 2p4c2me
  name: 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
  formula: C14H22N3O17P3
  formula_neutral: C14H22N3O17P3
  charge: -4
  kegg: C11436
- id: 2pg
  name: D-Glycerate 2-phosphate
  formula: C3H4O7P
  formula_neutral: C3H4O7P
  charge: -3
  kegg: C00631
- id: 2pglyc
  name: 2-Phosphoglycolate
  formula: C2H2O6P
  formula_neutral: C2H2O6P
  charge: -3
  kegg: C00988
- id: 2shchc
  name: 2-Succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate
  formula: C11H10O6
  formula_neutral: C11H10O6
  charge: -2
  kegg: C05817
- id: 2tddacp
  name: trans-Dodec-2-enoyl-[acyl-carrier protein]
  formula: C12H21OX
  formula_neutral: C12H21OX
  charge: 0
  kegg: C05758
  cas: '2148941'
- id: 2tdeacp
  name: trans-Dec-2-enoyl-[acyl-carrier protein]
  formula: C10H17OX
  formula_neutral: C10H17OX
  charge: 0
  kegg: C05754
  cas: '2148941'
- id: 2theacp
  name: trans-Hex-2-enoyl-[acp]
  formula: C6H9OX
  formula_neutral: C6H9OX
  charge: 0
  kegg: C05748
  cas: '2148941'
- id: 2tocdacp
  name: trans-Octadec-2-enoyl-[acyl-carrier-protein]
  formula: C18H33OX
  formula_neutral: C18H33OX
  charge: 0
- id: 2toceacp
  name: trans-Oct-2-enoyl-[acp]
  formula: C8H13OX
  formula_neutral: C8H13OX
  charge: 0
  kegg: C05751
  cas: '2148941'
- id: 34hpp
  name: 3-(4-Hydroxyphenyl)pyruvate
  formula: C9H7O4
  formula_neutral: C9H7O4
  charge: -1
  kegg: C01179
- id: 3c2hmp
  name: 3-Carboxy-2-hydroxy-4-methylpentanoate
  formula: C7H10O5
  formula_neutral: C7H10O5
  charge: -2
  kegg: C04411
- id: 3c3hmp
  name: 3-Carboxy-3-hydroxy-4-methylpentanoate
  formula: C7H10O5
  formula_neutral: C7H10O5
  charge: -2
  kegg: C02504
- id: 3c4mop
  name: 3-Carboxy-4-methyl-2-oxopentanoate
  formula: C7H8O5
  formula_neutral: C7H8O5
  charge: -2
  kegg: C04236
- id: 3dhq
  name: 3-Dehydroquinate
  formula: C7H9O6
  formula_neutral: C7H9O6
  charge: -1
  kegg: C00944
- id: 3dhsk
  name: 3-Dehydroshikimate
  formula: C7H7O5
  formula_neutral: C7H7O5
  charge: -1
  kegg: C02637
  cas: 10457-99-5
- id: 3hbacp
  name: (3R)-3-Hydroxybutanoyl-[acyl-carrier protein]
  formula: C4H7O2X
  formula_neutral: C4H7O2X
  charge: 0
  kegg: C04618
  cas: 320-77-4
- id: 3hddacp
  name: (R)-3-Hydroxydodecanoyl-[acyl-carrier protein]
  formula: C12H23O2X
  formula_neutral: C12H23O2X
  charge: 0
  kegg: C05757
  cas: '2148941'
- id: 3hdeacp
  name: (3R)-3-Hydroxydecanoyl-[acyl-carrier protein]
  formula: C10H19O2X
  formula_neutral: C10H19O2X
  charge: 0
  kegg: C04619
  cas: 320-77-4
- id: 3hhacp
  name: (R)-3-Hydroxyhexanoyl-[acp]
  formula: C6H11O2X
  formula_neutral: C6H11O2X
  charge: 0
  kegg: C05747
  cas: '2148941'
- id: 3hocacp
  name: (R)-3-Hydroxyoctanoyl-[acyl-carrier protein]
  formula: C8H15O2X
  formula_neutral: C8H15O2X
  charge: 0
  kegg: C04620
  cas: 320-77-4
- id: 3hocdacp
  name: (3R)-3-Hydroxyoctadecanoyl-[acyl-carrier protein]
  formula: C18H35O2X
  formula_neutral: C18H35O2X
  charge: 0
- id: 3hpaacp
  name: (3R)-3-Hydroxypalmitoyl-[acyl-carrier protein]
  formula: C16H31O2X
  formula_neutral: C16H31O2X
  charge: 0
  kegg: C04633
  cas: 50-29-3
- id: 3htdacp
  name: (3R)-3-Hydroxytetradecanoyl-[acyl-carrier protein]
  formula: C14H27O2X
  formula_neutral: C14H27O2X
  charge: 0
  kegg: C04688
  cas: 35687-86-6
- id: 3ig3p
  name: C'-(3-Indolyl)-glycerol 3-phosphate
  formula: C11H12NO6P
  formula_neutral: C11H12NO6P
  charge: -2
  kegg: C03506
- id: 3mob
  name: 3-Methyl-2-oxobutanoate
  formula: C5H7O3
  formula_neutral: C5H7O3
  charge: -1
  kegg: C00141
- id: 3mop
  name: (S)-3-Methyl-2-oxopentanoate
  formula: C6H9O3
  formula_neutral: C6H9O3
  charge: -1
  kegg: C00671
- id: 3oxddacp
  name: 3-Oxododecanoyl-[acyl-carrier protein]
  formula: C12H21O2X
  formula_neutral: C12H21O2X
  charge: 0
  kegg: C05756
  cas: '2148941'
- id: 3oxdeacp
  name: 3-Oxodecanoyl-[acyl-carrier protein]
  formula: C10H17O2X
  formula_neutral: C10H17O2X
  charge: 0
  kegg: C05753
  cas: '2148941'
- id: 3oxhacp
  name: 3-Oxohexanoyl-[acyl-carrier protein]
  formula: C6H9O2X
  formula_neutral: C6H9O2X
  charge: 0
  kegg: C05746
  cas: '2148941'
- id: 3oxhdacp
  name: 3-Oxohexadecanoyl-[acp]
  formula: C16H29O2X
  formula_neutral: C16H29O2X
  charge: 0
  kegg: C05762
  cas: '2148941'
- id: 3oxocacp
  name: 3-Oxooctanoyl-[acyl-carrier protein]
  formula: C8H13O2X
  formula_neutral: C8H13O2X
  charge: 0
  kegg: C05750
  cas: '2148941'
- id: 3oxocdacp
  name: 3-Oxooctadecanoyl-[acp]
  formula: C18H33O2X
  formula_neutral: C18H33O2X
  charge: 0
- id: 3oxtdacp
  name: 3-Oxotetradecanoyl-[acyl-carrier protein]
  formula: C14H25O2X
  formula_neutral: C14H25O2X
  charge: 0
  kegg: C05759
  cas: '2148941'
- id: 3pg
  name: 3-Phospho-D-glycerate
  formula: C3H4O7P
  formula_neutral: C3H4O7P
  charge: -3
  kegg: C00197
- id: 3php
  name: 3-Phosphohydroxypyruvate
  formula: C3H2O7P
  formula_neutral: C3H2O7P
  charge: -3
  kegg: C03232
- id: 3psme
  name: 5-O-(1-Carboxyvinyl)-3-phosphoshikimate
  formula: C10H9O10P
  formula_neutral: C10H9O10P
  charge: -4
  kegg: C01269
- id: 4abz
  name: 4-Aminobenzoate
  formula: C7H6NO2
  formula_neutral: C7H6NO2
  charge: -1
  kegg: C00568
  cas: 150-13-0
- id: 4adcho
  name: 4-amino-4-deoxychorismate
  formula: C10H10NO5
  formula_neutral: C10H10NO5
  charge: -1
  kegg: C11355
- id: 4ahmmp
  name: 4-Amino-5-hydroxymethyl-2-methylpyrimidine
  formula: C6H9N3O
  formula_neutral: C6H9N3O
  charge: 0
  kegg: C01279
  cas: 73-67-6
- id: 4ampm
  name: 4-Amino-2-methyl-5-phosphomethylpyrimidine
  formula: C6H8N3O4P
  formula_neutral: C6H8N3O4P
  charge: -2
  kegg: C04556
- id: 4c2me
  name: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
  formula: C14H23N3O14P2
  formula_neutral: C14H23N3O14P2
  charge: -2
  kegg: C11435
- id: 4h2oxg
  name: D-4-Hydroxy-2-oxoglutarate
  formula: C5H4O6
  formula_neutral: C5H4O6
  charge: -2
  kegg: C05946
- id: 4hba
  name: 4-Hydroxy-benzyl alcohol
  formula: C7H8O2
  formula_neutral: C7H8O2
  charge: 0
- id: 4hpro-LT
  name: trans-4-Hydroxy-L-proline
  formula: C5H9NO3
  formula_neutral: C5H9NO3
  charge: 0
  kegg: C01157
  cas: 51-35-4
- id: 4mop
  name: 4-Methyl-2-oxopentanoate
  formula: C6H9O3
  formula_neutral: C6H9O3
  charge: -1
  kegg: C00233
- id: 4mpetz
  name: 4-Methyl-5-(2-phosphoethyl)-thiazole
  formula: C6H8NO4PS
  formula_neutral: C6H8NO4PS
  charge: -2
  kegg: C04327
- id: 4pasp
  name: 4-Phospho-L-aspartate
  formula: C4H6NO7P
  formula_neutral: C4H6NO7P
  charge: -2
  kegg: C03082
- id: 4per
  name: 4-Phospho-D-erythronate
  formula: C4H6O8P
  formula_neutral: C4H6O8P
  charge: -3
  kegg: C03393
- id: 4ppan
  name: D-4'-Phosphopantothenate
  formula: C9H15NO8P
  formula_neutral: C9H15NO8P
  charge: -3
  kegg: C03492
- id: 4ppcys
  name: N-((R)-4-Phosphopantothenoyl)-L-cysteine
  formula: C12H20N2O9PS
  formula_neutral: C12H20N2O9PS
  charge: -3
  kegg: C04352
- id: 4r5au
  name: 4-(1-D-Ribitylamino)-5-aminouracil
  formula: C9H16N4O6
  formula_neutral: C9H16N4O6
  charge: 0
  kegg: C04732
- id: 5678thh
  name: (6R)-6-(L-erythro-1,2-Dihydroxypropyl)-5,6,7,8-tetrahydro-4a-hydroypterin
  formula: C9H14N4O3
  formula_neutral: C9H14N4O3
  charge: 0
  kegg: C06486
- id: 5aizc
  name: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
  formula: C9H11N3O9P
  formula_neutral: C9H11N3O9P
  charge: -3
  kegg: C04751
- id: 5aop
  name: 5-Amino-4-oxopentanoate
  formula: C5H9NO3
  formula_neutral: C5H9NO3
  charge: 0
  kegg: C00430
  cas: 106-60-5
- id: 5aprbu
  name: 5-Amino-6-(5'-phosphoribitylamino)uracil
  formula: C9H15N4O9P
  formula_neutral: C9H15N4O9P
  charge: -2
  kegg: C04454
- id: 5apru
  name: 5-Amino-6-(5'-phosphoribosylamino)uracil
  formula: C9H13N4O9P
  formula_neutral: C9H13N4O9P
  charge: -2
  kegg: C01268
- id: 5fothf
  name: 5-Formyltetrahydrofolate
  formula: C20H21N7O7
  formula_neutral: C20H21N7O7
  charge: -2
  kegg: C03479
  cas: 58-05-9
- id: 5mcsn
  name: 5-Methylcytosine
  formula: C5H7N3O
  formula_neutral: C5H7N3O
  charge: 0
  kegg: C02376
  cas: 554-01-8
- id: 5mdr1p
  name: 5-Methylthio-5-deoxy-D-ribose 1-phosphate
  formula: C6H11O7PS
  formula_neutral: C6H11O7PS
  charge: -2
  kegg: C04188
- id: 5mta
  name: 5-Methylthioadenosine
  formula: C11H15N5O3S
  formula_neutral: C11H15N5O3S
  charge: 0
  kegg: C00170
  cas: 2457-80-9
- id: 5mthf
  name: 5-Methyltetrahydrofolate
  formula: C20H24N7O6
  formula_neutral: C20H24N7O6
  charge: -1
  kegg: C00440
- id: 5mthglu
  name: 5-Methyltetrahydropteroyltri-L-glutamate
  formula: C25H34N8O12
  formula_neutral: C25H34N8O12
  charge: -2
  kegg: C04489
- id: 5oxpro
  name: 5-Oxoproline
  formula: C5H6NO3
  formula_neutral: C5H6NO3
  charge: -1
  kegg: C01879
  cas: 98-79-3
- id: 6pgc
  name: 6-Phospho-D-gluconate
  formula: C6H10O10P
  formula_neutral: C6H10O10P
  charge: -3
  kegg: C00345
- id: 6pgl
  name: 6-phospho-D-glucono-1,5-lactone
  formula: C6H9O9P
  formula_neutral: C6H9O9P
  charge: -2
  kegg: C01236
- id: 6pthp
  name: 6-Pyruvoyl-5,6,7,8-tetrahydropterin
  formula: C9H11N5O3
  formula_neutral: C9H11N5O3
  charge: 0
  kegg: C03684
- id: 78dhp
  name: (6R)-6-(L-erythro-1,2-Dihydroxypropyl)-7,8-dihydro-6H-pterin
  formula: C9H12N4O2
  formula_neutral: C9H12N4O2
  charge: 0
  kegg: C06487
- id: 8aonn
  name: 8-Amino-7-oxononanoate
  formula: C9H17NO3
  formula_neutral: C9H17NO3
  charge: 0
  kegg: C01092
- id: 9hdeacp
  name: Palmitoleic acid
  formula: C16H29OX
  formula_neutral: C16H29OX
  charge: 0
- id: Ncarbsar
  name: N-Carbamoylsarcosine
  formula: C4H7N2O3
  formula_neutral: C4H7N2O3
  charge: -1
  kegg: C01043
- id: Nmimzd24d
  name: N-Methylhydantoin
  formula: C4H6N2O2
  formula_neutral: C4H6N2O2
  charge: 0
  kegg: C02565
  cas: 616-04-6
- id: PC_ox
  name: Plastocyanin (oxidized form)
  formula: CuX
  formula_neutral: CuX
  charge: 2
- id: PC_rd
  name: Plastocyanin (reduced form)
  formula: CuX
  formula_neutral: CuX
  charge: 1
- id: ac
  name: Acetate
  formula: C2H3O2
  formula_neutral: C2H3O2
  charge: -1
  kegg: C00033
  cas: 64-19-7
- id: acacp
  name: Acetyl-ACP
  formula: C2H3OX
  formula_neutral: C2H3OX
  charge: 0
  kegg: C03939
- id: acald
  name: Acetaldehyde
  formula: C2H4O
  formula_neutral: C2H4O
  charge: 0
  kegg: C00084
  cas: 75-07-0
- id: accoa
  name: Acetyl-CoA
  formula: C23H34N7O17P3S
  formula_neutral: C23H34N7O17P3S
  charge: -4
  kegg: C00024
  cas: 72-89-9
- id: acg5p
  name: N-Acetyl-L-glutamyl 5-phosphate
  formula: C7H9NO8P
  formula_neutral: C7H9NO8P
  charge: -3
  kegg: C04133
- id: acg5sa
  name: N-Acetyl-L-glutamate 5-semialdehyde
  formula: C7H10NO4
  formula_neutral: C7H10NO4
  charge: -1
  kegg: C01250
- id: acgam1p
  name: N-Acetyl-D-glucosamine 1-phosphate
  formula: C8H14NO9P
  formula_neutral: C8H14NO9P
  charge: -2
  kegg: C04256
- id: acgam6p
  name: N-Acetyl-D-glucosamine 6-phosphate
  formula: C8H14NO9P
  formula_neutral: C8H14NO9P
  charge: -2
  kegg: C00357
  cas: 102029-88-9
- id: acglu
  name: N-Acetyl-L-glutamate
  formula: C7H9NO5
  formula_neutral: C7H9NO5
  charge: -2
  kegg: C00624
  cas: 1188-37-0
- id: achms
  name: O-Acetyl-L-homoserine
  formula: C6H11NO4
  formula_neutral: C6H11NO4
  charge: 0
  kegg: C01077
- id: acmam
  name: N-Acetyl-D-muramoate
  formula: C11H18NO8
  formula_neutral: C11H18NO8
  charge: -1
  kegg: C05887
  cas: 91-64-5
- id: acmama
  name: N-Acetyl-D-muramoyl-L-alanine
  formula: C14H23N2O9
  formula_neutral: C14H23N2O9
  charge: -1
  kegg: C02999
  cas: '218084'
- id: acmana
  name: N-Acetyl-D-mannosamine
  formula: C8H15NO6
  formula_neutral: C8H15NO6
  charge: 0
  kegg: C00645
  cas: 3615-17-6
- id: acmanap
  name: N-Acetyl-D-mannosamine 6-phosphate
  formula: C8H14NO9P
  formula_neutral: C8H14NO9P
  charge: -2
  kegg: C04257
  cas: 157296-99-6
- id: acnam
  name: N-Acetylneuraminate
  formula: C11H18NO9
  formula_neutral: C11H18NO9
  charge: -1
  kegg: C00270
  cas: 131-48-6
- id: acorn
  name: N2-Acetyl-L-ornithine
  formula: C7H14N2O3
  formula_neutral: C7H14N2O3
  charge: 0
  kegg: C00437
- id: acp
  name: Acyl carrier protein
  formula: HX
  formula_neutral: HX
  charge: 0
  kegg: C00229
- id: acser
  name: O-Acetyl-L-serine
  formula: C5H9NO4
  formula_neutral: C5H9NO4
  charge: 0
  kegg: C00979
  cas: 66638-22-0
- id: actacp
  name: Acetoacetyl-ACP
  formula: C4H5O2X
  formula_neutral: C4H5O2X
  charge: 0
  kegg: C05744
  cas: '2148941'
- id: actp
  name: Acetyl phosphate
  formula: C2H3O5P
  formula_neutral: C2H3O5P
  charge: -2
  kegg: C00227
  cas: 19926-71-7
- id: adcoba
  name: Adenosyl cobinamide
  formula: C58H84CoN16O11
  formula_neutral: C58H84CoN16O11
  charge: 1
  kegg: C06508
- id: adcobap
  name: Adenosyl cobinamide phosphate
  formula: C58H83CoN16O14P
  formula_neutral: C58H83CoN16O14P
  charge: -1
  kegg: C06509
- id: adcobdam
  name: Adenosyl cobyrinate diamide
  formula: C55H68CoN11O15
  formula_neutral: C55H68CoN11O15
  charge: -4
  kegg: C06506
- id: adcobhex
  name: Adenosyl-cobyric acid
  formula: C55H76CoN15O11
  formula_neutral: C55H76CoN15O11
  charge: 0
  kegg: C06507
- id: ade
  name: Adenine
  formula: C5H5N5
  formula_neutral: C5H5N5
  charge: 0
  kegg: C00147
  cas: 73-24-5
- id: adgcoba
  name: Adenosine-GDP-cobinamide
  formula: C68H95CoN21O21P2
  formula_neutral: C68H95CoN21O21P2
  charge: -1
  kegg: C06510
  cas: 7625-23-2
- id: adn
  name: Adenosine
  formula: C10H13N5O4
  formula_neutral: C10H13N5O4
  charge: 0
  kegg: C00212
  cas: 58-61-7
- id: adp
  name: ADP
  formula: C10H12N5O10P2
  formula_neutral: C10H12N5O10P2
  charge: -3
  kegg: C00008
  cas: 20398-34-9
- id: adpglc
  name: ADPglucose
  formula: C16H23N5O15P2
  formula_neutral: C16H23N5O15P2
  charge: -2
  kegg: C00498
- id: adprib
  name: ADPribose
  formula: C15H21N5O14P2
  formula_neutral: C15H21N5O14P2
  charge: -2
  kegg: C00301
- id: ahcys
  name: S-Adenosyl-L-homocysteine
  formula: C14H20N6O5S
  formula_neutral: C14H20N6O5S
  charge: 0
  kegg: C00021
  cas: 979-92-0
- id: ahdt
  name: 2-Amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)dihydropteridine triphosphate
  formula: C9H12N5O13P3
  formula_neutral: C9H12N5O13P3
  charge: -4
  kegg: C04895
- id: aicar
  name: 5-Amino-1-(5-Phospho-D-ribosyl)imidazole-4-carboxamide
  formula: C9H13N4O8P
  formula_neutral: C9H13N4O8P
  charge: -2
  kegg: C04677
  cas: 3031-94-5
- id: air
  name: 5-amino-1-(5-phospho-D-ribosyl)imidazole
  formula: C8H12N3O7P
  formula_neutral: C8H12N3O7P
  charge: -2
  kegg: C03373
  cas: 25635-88-5
- id: akg
  name: 2-Oxoglutarate
  formula: C5H4O5
  formula_neutral: C5H4O5
  charge: -2
  kegg: C00026
  cas: 328-50-7
- id: ala-B
  name: beta-Alanine
  formula: C3H7NO2
  formula_neutral: C3H7NO2
  charge: 0
  kegg: C00099
  cas: 107-95-9
- id: ala-D
  name: D-Alanine
  formula: C3H7NO2
  formula_neutral: C3H7NO2
  charge: 0
  kegg: C00133
  cas: 338-69-2
- id: ala-L
  name: L-Alanine
  formula: C3H7NO2
  formula_neutral: C3H7NO2
  charge: 0
  kegg: C00041
  cas: 56-41-7
- id: alaala
  name: D-Alanyl-D-alanine
  formula: C6H12N2O3
  formula_neutral: C6H12N2O3
  charge: 0
  kegg: C00993
  cas: 923-16-0
- id: alac-S
  name: (S)-2-Acetolactate
  formula: C5H7O4
  formula_neutral: C5H7O4
  charge: -1
  kegg: C06010
- id: alatrna
  name: L-Alanyl-tRNA(Ala)
  formula: C3H7NO2X
  formula_neutral: C3H7NO2X
  charge: 1
  kegg: C00886
- id: amet
  name: S-Adenosyl-L-methionine
  formula: C15H23N6O5S
  formula_neutral: C15H23N6O5S
  charge: 1
  kegg: C00019
  cas: 29908-03-0
- id: amob
  name: S-Adenosyl-4-methylthio-2-oxobutanoate
  formula: C15H19N5O6S
  formula_neutral: C15H19N5O6S
  charge: 0
  kegg: C04425
- id: amopbut-L
  name: 2-Amino-3-oxo-4-phosphonooxybutyrate
  formula: C4H6NO7P
  formula_neutral: C4H6NO7P
  charge: -2
  kegg: C07335
- id: amoppro
  name: 3-Amino-2-oxopropyl phosphate
  formula: C3H6NO5P
  formula_neutral: C3H6NO5P
  charge: -2
  kegg: C11638
- id: amp
  name: AMP
  formula: C10H12N5O7P
  formula_neutral: C10H12N5O7P
  charge: -2
  kegg: C00020
  cas: 61-19-8
- id: anth
  name: Anthranilate
  formula: C7H6NO2
  formula_neutral: C7H6NO2
  charge: -1
  kegg: C00108
  cas: 118-92-3
- id: ap4a
  name: P1,P4-Bis(5'-adenosyl) tetraphosphate
  formula: C20H24N10O19P4
  formula_neutral: C20H24N10O19P4
  charge: -4
  kegg: C01260
- id: apoacp
  name: Apoprotein [acyl carrier protein]
  formula: RHO
  formula_neutral: RHO
  charge: 0
  kegg: C03688
- id: aps
  name: Adenosine 5'-phosphosulfate
  formula: C10H12N5O10PS
  formula_neutral: C10H12N5O10PS
  charge: -2
  kegg: C00224
- id: arg-L
  name: L-Arginine
  formula: C6H15N4O2
  formula_neutral: C6H15N4O2
  charge: 1
  kegg: C00062
  cas: 74-79-3
- id: arg-L-asp-L
  name: L-arginine-L-aspartate monomer of cyanophycin
  formula: C10H20N5O5
  formula_neutral: C10H20N5O5
  charge: 1
- id: arg-L-asp-L-asp-L
  name: Cyanophycin monomer with aspartate
  formula: C14H25N6O8
  formula_neutral: C14H25N6O8
  charge: 1
- id: argsuc
  name: N(omega)-(L-Arginino)succinate
  formula: C10H17N4O6
  formula_neutral: C10H17N4O6
  charge: -1
  kegg: C03406
- id: argtrna
  name: L-Arginyl-tRNA(Arg)
  formula: C6H15N4O2X
  formula_neutral: C6H15N4O2X
  charge: 2
  kegg: C02163
- id: arsna
  name: Arsenate
  formula: AsHO4
  formula_neutral: AsHO4
  charge: -2
  kegg: C01478
  cas: 7778-39-4
- id: arsni2
  name: Arsenite
  formula: AsH3O3
  formula_neutral: AsH3O3
  charge: 0
  kegg: C06697
  cas: 15502-74-6
- id: asn-L
  name: L-Asparagine
  formula: C4H8N2O3
  formula_neutral: C4H8N2O3
  charge: 0
  kegg: C00152
  cas: 70-47-3
- id: asntrna
  name: L-Asparaginyl-tRNA(Asn)
  formula: C4H8N2O3X
  formula_neutral: C4H8N2O3X
  charge: 1
  kegg: C03402
- id: asp-L
  name: L-Aspartate
  formula: C4H6NO4
  formula_neutral: C4H6NO4
  charge: -1
  kegg: C00049
  cas: 56-84-8
- id: aspsa
  name: L-Aspartate 4-semialdehyde
  formula: C4H7NO3
  formula_neutral: C4H7NO3
  charge: 0
  kegg: C00441
- id: asptrna
  name: L-Aspartyl-tRNA(Asp)
  formula: C4H6NO4X
  formula_neutral: C4H6NO4X
  charge: 0
  kegg: C02984
- id: asptrna_asn
  name: L-Aspartyl-tRNA(Asn)
  formula: C4H6NO4X
  formula_neutral: C4H6NO4X
  charge: 0
- id: atp
  name: ATP
  formula: C10H12N5O13P3
  formula_neutral: C10H12N5O13P3
  charge: -4
  kegg: C00002
  cas: 56-65-5
- id: btamp
  name: Biotinyl-5'-AMP
  formula: C20H27N7O9PS
  formula_neutral: C20H27N7O9PS
  charge: -1
  kegg: C05921
- id: btn
  name: Biotin
  formula: C10H15N2O3S
  formula_neutral: C10H15N2O3S
  charge: -1
  kegg: C00120
  cas: 58-85-5
- id: butacp
  name: Butyryl-[acyl-carrier protein]
  formula: C4H7OX
  formula_neutral: C4H7OX
  charge: 0
  kegg: C05745
  cas: '2148941'
- id: ca2
  name: Calcium
  formula: Ca
  formula_neutral: Ca
  charge: 2
  kegg: C00076
  cas: 7440-70-2
- id: cbasp
  name: N-Carbamoyl-L-aspartate
  formula: C5H6N2O5
  formula_neutral: C5H6N2O5
  charge: -2
  kegg: C00438
- id: cbp
  name: Carbamoyl phosphate
  formula: CH2NO5P
  formula_neutral: CH2NO5P
  charge: -2
  kegg: C00169
- id: cdp
  name: CDP
  formula: C9H12N3O11P2
  formula_neutral: C9H12N3O11P2
  charge: -3
  kegg: C00112
  cas: 63-38-7
- id: cdpdag_CN
  name: CDPDiacylglycerol (Cyanothece)
  formula: C2274H3864O750P100N150
  formula_neutral: C2274H3864O750P100N150
  charge: -100
- id: cell
  name: Cellulose
  formula: C6H10O5
  formula_neutral: C6H10O5
  charge: 0
  kegg: C00760
  cas: 9004-34-6
- id: cgly
  name: Cys-Gly
  formula: C5H10N2O3S
  formula_neutral: C5H10N2O3S
  charge: 0
  kegg: C01419
  cas: 19246-18-5
- id: chla
  name: Chlorophyll a
  formula: C55H72MgN4O5
  formula_neutral: C55H72MgN4O5
  charge: 2
  cas: 479-61-8
- id: chor
  name: Chorismate
  formula: C10H8O6
  formula_neutral: C10H8O6
  charge: -2
  kegg: C00251
  cas: 55508-12-8
- id: cico
  name: 2-Methylmaleate
  formula: C5H4O4
  formula_neutral: C5H4O4
  charge: -2
  kegg: C02226
- id: cima
  name: Citramalate
  formula: C5H6O5
  formula_neutral: C5H6O5
  charge: -2
  kegg: C02612
- id: cit
  name: Citrate
  formula: C6H5O7
  formula_neutral: C6H5O7
  charge: -3
  kegg: C00158
  cas: 77-92-9
- id: citr-L
  name: L-Citrulline
  formula: C6H13N3O3
  formula_neutral: C6H13N3O3
  charge: 0
  kegg: C00327
  cas: 372-75-8
- id: clpyda
  name: Chlorophyllide a
  formula: C35H33MgN4O5
  formula_neutral: C35H33MgN4O5
  charge: 1
  kegg: C02139
  cas: 14897-06-4
- id: cmp
  name: CMP
  formula: C9H12N3O8P
  formula_neutral: C9H12N3O8P
  charge: -2
  kegg: C00055
  cas: 84-52-6
- id: cmpacna
  name: CMP-N-acetylneuraminate
  formula: C20H29N4O16P
  formula_neutral: C20H29N4O16P
  charge: -2
  kegg: C00128
  cas: 3063-71-6
- id: co1dam
  name: Cob(I)yrinate a,c diamide
  formula: C45H59CoN6O12
  formula_neutral: C45H59CoN6O12
  charge: -4
  kegg: C06505
- id: co2
  name: CO2
  formula: CO2
  formula_neutral: CO2
  charge: 0
  kegg: C00011
  cas: 124-38-9
- id: co2dam
  name: Cob(II)yrinate a,c diamide
  formula: C45H59CoN6O12
  formula_neutral: C45H59CoN6O12
  charge: -3
  kegg: C06504
  cas: 7625-23-2
- id: co2dam_1
  name: Cob(II)yrinate a,c diamide
  formula: C45H56CoN6O12
  formula_neutral: C45H56CoN6O12
  charge: -4
  kegg: C06504
  cas: 7625-23-2
- id: coa
  name: Coenzyme A
  formula: C21H32N7O16P3S
  formula_neutral: C21H32N7O16P3S
  charge: -4
  kegg: C00010
  cas: 85-61-0
- id: cobalt2
  name: Co2+
  formula: Co
  formula_neutral: Co
  charge: 2
  kegg: C00175
  cas: 7440-48-4
- id: cobamcoa
  name: Cobamide coenzyme
  formula: C72H100CoN18O17P
  formula_neutral: C72H100CoN18O17P
  charge: 0
  kegg: C00194
- id: cpppg3
  name: Coproporphyrinogen III
  formula: C36H40N4O8
  formula_neutral: C36H40N4O8
  charge: -4
  kegg: C03263
  cas: 2624-63-7
- id: creat
  name: Creatine
  formula: C4H9N3O2
  formula_neutral: C4H9N3O2
  charge: 0
  kegg: C00300
  cas: 57-00-1
- id: crtn
  name: Creatinine
  formula: C4H7N3O
  formula_neutral: C4H7N3O
  charge: 0
  kegg: C00791
  cas: 60-27-5
- id: csn
  name: Cytosine
  formula: C4H5N3O
  formula_neutral: C4H5N3O
  charge: 0
  kegg: C00380
  cas: 71-30-7
- id: ctp
  name: CTP
  formula: C9H12N3O14P3
  formula_neutral: C9H12N3O14P3
  charge: -4
  kegg: C00063
  cas: 65-47-4
- id: cu2
  name: Cu2+
  formula: Cu
  formula_neutral: Cu
  charge: 2
  kegg: C00070
- id: cyanophycin
  name: Cyanophycin dimer
  formula: C20H38N10O9
  formula_neutral: C20H38N10O9
  charge: 2
- id: cyc6_ox
  name: Cytochrome c6 (oxidized form)
  formula: FeX
  formula_neutral: FeX
  charge: 3
- id: cyc6_rd
  name: Cytochrome c6 (reduced form)
  formula: FeX
  formula_neutral: FeX
  charge: 2
- id: cys-L
  name: L-Cysteine
  formula: C3H7NO2S
  formula_neutral: C3H7NO2S
  charge: 0
  kegg: C00097
  cas: 52-90-4
- id: cystrna
  name: L-Cysteinyl-tRNA(Cys)
  formula: C3H7NO2SX
  formula_neutral: C3H7NO2SX
  charge: 1
  kegg: C03125
- id: cytd
  name: Cytidine
  formula: C9H13N3O5
  formula_neutral: C9H13N3O5
  charge: 0
  kegg: C00475
  cas: 65-46-3
- id: dad-2
  name: Deoxyadenosine
  formula: C10H13N5O3
  formula_neutral: C10H13N5O3
  charge: 0
  kegg: C00559
  cas: 958-09-8
- id: dad-5
  name: 5'-Deoxyadenosine
  formula: C10H13N5O3
  formula_neutral: C10H13N5O3
  charge: 0
  kegg: C05198
- id: dadp
  name: dADP
  formula: C10H12N5O9P2
  formula_neutral: C10H12N5O9P2
  charge: -3
  kegg: C00206
- id: damp
  name: dAMP
  formula: C10H12N5O6P
  formula_neutral: C10H12N5O6P
  charge: -2
  kegg: C00360
  cas: 653-63-4
- id: dann
  name: 7,8-Diaminononanoate
  formula: C9H21N2O2
  formula_neutral: C9H21N2O2
  charge: 1
  kegg: C01037
- id: datp
  name: dATP
  formula: C10H12N5O12P3
  formula_neutral: C10H12N5O12P3
  charge: -4
  kegg: C00131
  cas: 1927-31-7
- id: db4p
  name: 3,4-dihydroxy-2-butanone 4-phosphate
  formula: C4H7O6P
  formula_neutral: C4H7O6P
  charge: -2
- id: dcamp
  name: N6-(1,2-Dicarboxyethyl)-AMP
  formula: C14H14N5O11P
  formula_neutral: C14H14N5O11P
  charge: -4
  kegg: C03794
- id: dcdp
  name: dCDP
  formula: C9H12N3O10P2
  formula_neutral: C9H12N3O10P2
  charge: -3
  kegg: C00705
- id: dcmp
  name: dCMP
  formula: C9H12N3O7P
  formula_neutral: C9H12N3O7P
  charge: -2
  kegg: C00239
  cas: 1032-65-1
- id: dctp
  name: dCTP
  formula: C9H12N3O13P3
  formula_neutral: C9H12N3O13P3
  charge: -4
  kegg: C00458
  cas: 2056-98-6
- id: dcyt
  name: Deoxycytidine
  formula: C9H13N3O4
  formula_neutral: C9H13N3O4
  charge: 0
  kegg: C00881
  cas: 951-77-9
- id: ddcaacp
  name: Dodecanoyl-ACP (n-C12:0ACP)
  formula: C12H23OX
  formula_neutral: C12H23OX
  charge: 0
- id: decacp
  name: Decanoyl-[acyl-carrier protein]
  formula: C10H19OX
  formula_neutral: C10H19OX
  charge: 0
  kegg: C05755
  cas: '2148941'
- id: dgdg_CN
  name: Digalactosyldiacylglycerol (Cyanothece)
  formula: C2424H4314O750
  formula_neutral: C2424H4314O750
  charge: 0
- id: dgdp
  name: dGDP
  formula: C10H12N5O10P2
  formula_neutral: C10H12N5O10P2
  charge: -3
  kegg: C00361
- id: dgmp
  name: dGMP
  formula: C10H12N5O7P
  formula_neutral: C10H12N5O7P
  charge: -2
  kegg: C00362
  cas: 902-04-5
- id: dgsn
  name: Deoxyguanosine
  formula: C10H13N5O4
  formula_neutral: C10H13N5O4
  charge: 0
  kegg: C00330
  cas: 961-07-9
- id: dgtp
  name: dGTP
  formula: C10H12N5O13P3
  formula_neutral: C10H12N5O13P3
  charge: -4
  kegg: C00286
  cas: 2564-35-4
- id: dha
  name: Dihydroxyacetone
  formula: C3H6O3
  formula_neutral: C3H6O3
  charge: 0
  kegg: C00184
  cas: 96-26-4
- id: dhap
  name: Dihydroxyacetone phosphate
  formula: C3H5O6P
  formula_neutral: C3H5O6P
  charge: -2
  kegg: C00111
  cas: 57-04-5
- id: dhf
  name: 7,8-Dihydrofolate
  formula: C19H19N7O6
  formula_neutral: C19H19N7O6
  charge: -2
  kegg: C00415
  cas: 4033-27-6
- id: dhna
  name: 1,4-Dihydroxy-2-naphthoate
  formula: C11H7O4
  formula_neutral: C11H7O4
  charge: -1
  kegg: C03657
- id: dhnpt
  name: 2-Amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine
  formula: C9H13N5O4
  formula_neutral: C9H13N5O4
  charge: 0
  kegg: C04874
- id: dhor-S
  name: (S)-Dihydroorotate
  formula: C5H5N2O4
  formula_neutral: C5H5N2O4
  charge: -1
  kegg: C00337
  cas: 5988-19-2
- id: dhpt
  name: Dihydropteroate
  formula: C14H13N6O3
  formula_neutral: C14H13N6O3
  charge: -1
  kegg: C00921
- id: din
  name: Deoxyinosine
  formula: C10H12N4O4
  formula_neutral: C10H12N4O4
  charge: 0
  kegg: C05512
  cas: 890-38-0
- id: dmlz
  name: 6,7-Dimethyl-8-(1-D-ribityl)lumazine
  formula: C13H18N4O6
  formula_neutral: C13H18N4O6
  charge: 0
  kegg: C04332
- id: dmphq
  name: 2-Phytyl-1,4-naphthoquinone
  formula: C30H44O2
  formula_neutral: C30H44O2
  charge: 0
  kegg: C13309
- id: dmpp
  name: Dimethylallyl diphosphate
  formula: C5H9O7P2
  formula_neutral: C5H9O7P2
  charge: -3
  kegg: C00235
  cas: 358-71-4
- id: dna_CN
  name: DNA, Cyanothece 51142
  formula: C981H1131N369O600P100
  formula_neutral: C981H1131N369O600P100
  charge: -100
- id: dnad
  name: Deamino-NAD+
  formula: C21H24N6O15P2
  formula_neutral: C21H24N6O15P2
  charge: -2
  kegg: C00857
- id: dpcoa
  name: Dephospho-CoA
  formula: C21H33N7O13P2S
  formula_neutral: C21H33N7O13P2S
  charge: -2
  kegg: C00882
- id: dplpt
  name: Diploptene
  formula: C30H50
  formula_neutral: C30H50
  charge: 0
  kegg: C06310
  cas: 7440-38-2
- id: drib
  name: Deoxyribose
  formula: C5H10O4
  formula_neutral: C5H10O4
  charge: 0
  kegg: C01801
  cas: 533-67-5
- id: dtbt
  name: Dethiobiotin
  formula: C10H17N2O3
  formula_neutral: C10H17N2O3
  charge: -1
  kegg: C01909
- id: dtdp
  name: dTDP
  formula: C10H13N2O11P2
  formula_neutral: C10H13N2O11P2
  charge: -3
  kegg: C00363
- id: dtdp6dm
  name: dTDP-6-deoxy-L-mannose
  formula: C16H24N2O15P2
  formula_neutral: C16H24N2O15P2
  charge: -2
  kegg: C03319
  cas: 572-96-3
- id: dtdpddg
  name: dTDP-4-dehydro-6-deoxy-D-glucose
  formula: C16H22N2O15P2
  formula_neutral: C16H22N2O15P2
  charge: -2
  kegg: C00687
- id: dtdpddm
  name: dTDP-4-dehydro-6-deoxy-L-mannose
  formula: C16H22N2O15P2
  formula_neutral: C16H22N2O15P2
  charge: -2
  kegg: C00688
- id: dtdpglc
  name: dTDPglucose
  formula: C16H24N2O16P2
  formula_neutral: C16H24N2O16P2
  charge: -2
  kegg: C00842
- id: dtmp
  name: dTMP
  formula: C10H13N2O8P
  formula_neutral: C10H13N2O8P
  charge: -2
  kegg: C00364
  cas: 365-07-1
- id: dtpcudcpp
  name: di-trans,poly-cis-Undecaprenyl diphosphate
  formula: C55H89O7P2
  formula_neutral: C55H89O7P2
  charge: -3
  kegg: C04574
- id: dttp
  name: dTTP
  formula: C10H13N2O14P3
  formula_neutral: C10H13N2O14P3
  charge: -4
  kegg: C00459
- id: dudp
  name: dUDP
  formula: C9H11N2O11P2
  formula_neutral: C9H11N2O11P2
  charge: -3
  kegg: C01346
- id: dump
  name: dUMP
  formula: C9H11N2O8P
  formula_neutral: C9H11N2O8P
  charge: -2
  kegg: C00365
  cas: 964-26-1
- id: duri
  name: Deoxyuridine
  formula: C9H12N2O5
  formula_neutral: C9H12N2O5
  charge: 0
  kegg: C00526
  cas: 951-78-0
- id: dutp
  name: dUTP
  formula: C9H11N2O14P3
  formula_neutral: C9H11N2O14P3
  charge: -4
  kegg: C00460
- id: dvpc
  name: Divinylprotochlorophyllide
  formula: C35H29MgN4O5
  formula_neutral: C35H29MgN4O5
  charge: 1
  kegg: C11831
- id: dxyl5p
  name: 1-deoxy-D-xylulose 5-phosphate
  formula: C5H9O7P
  formula_neutral: C5H9O7P
  charge: -2
  kegg: C11437
- id: e4h2oxg
  name: L-erythro-4-Hydroxyglutamate
  formula: C5H8NO5
  formula_neutral: C5H8NO5
  charge: -1
  kegg: C05947
- id: e4p
  name: D-Erythrose 4-phosphate
  formula: C4H7O7P
  formula_neutral: C4H7O7P
  charge: -2
  kegg: C00279
  cas: 585-18-2
- id: eig3p
  name: D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate
  formula: C6H9N2O6P
  formula_neutral: C6H9N2O6P
  charge: -2
  kegg: C04666
- id: emma
  name: D-erythro-3-Methylmalate
  formula: C5H6O5
  formula_neutral: C5H6O5
  charge: -2
  kegg: C06032
- id: etoh
  name: Ethanol
  formula: C2H6O
  formula_neutral: C2H6O
  charge: 0
  kegg: C00469
  cas: 64-17-5
- id: f1p
  name: D-Fructose 1-phosphate
  formula: C6H11O9P
  formula_neutral: C6H11O9P
  charge: -2
  kegg: C02976
  cas: 15978-08-2
- id: f6p
  name: D-Fructose 6-phosphate
  formula: C6H11O9P
  formula_neutral: C6H11O9P
  charge: -2
  kegg: C00085
  cas: 643-13-0
- id: fad
  name: FAD
  formula: C27H31N9O15P2
  formula_neutral: C27H31N9O15P2
  charge: -2
  kegg: C00016
  cas: 146-14-5
- id: fadh2
  name: FADH2
  formula: C27H33N9O15P2
  formula_neutral: C27H33N9O15P2
  charge: -2
  kegg: C01352
- id: fdp
  name: D-Fructose 1,6-bisphosphate
  formula: C6H10O12P2
  formula_neutral: C6H10O12P2
  charge: -4
  kegg: C00354
  cas: 488-69-7
- id: fdxo-2-2
  name: ferredoxin (oxidixed form, [2Fe-2S] type
  formula: Fe2S2X
  formula_neutral: Fe2S2X
  charge: 2
- id: fdxr-2-2
  name: ferredoxin (reduced form, [2Fe-2S] type)
  formula: Fe2S2X
  formula_neutral: Fe2S2X
  charge: 1
- id: fe2
  name: Fe2+
  formula: Fe
  formula_neutral: Fe
  charge: 2
  kegg: C00023
- id: fe3
  name: Fe3+
  formula: Fe
  formula_neutral: Fe
  charge: 3
  kegg: C00023
- id: fgam
  name: N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide
  formula: C8H13N2O9P
  formula_neutral: C8H13N2O9P
  charge: -2
  kegg: C04376
- id: fmet
  name: N-Formyl-L-methionine
  formula: C6H10NO3S
  formula_neutral: C6H10NO3S
  charge: -1
  kegg: C03145
  cas: 4289-98-9
- id: fmettrna
  name: N-Formylmethionyl-tRNA
  formula: C6H11NO3SX
  formula_neutral: C6H11NO3SX
  charge: 1
  kegg: C03294
- id: fmn
  name: Flavin mononucleotide
  formula: C17H19N4O9P
  formula_neutral: C17H19N4O9P
  charge: -2
  kegg: C00061
  cas: 146-17-8
- id: formate
  name: Formate
  formula: CH1O2
  formula_neutral: CH1O2
  charge: -1
  kegg: C00058
  cas: 64-18-6
- id: fpram
  name: 2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine
  formula: C8H14N3O8P
  formula_neutral: C8H14N3O8P
  charge: -2
  kegg: C04640
- id: fprica
  name: 5-Formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
  formula: C10H13N4O9P
  formula_neutral: C10H13N4O9P
  charge: -2
  kegg: C04734
- id: frdp
  name: Farnesyl diphosphate
  formula: C15H25O7P2
  formula_neutral: C15H25O7P2
  charge: -3
  kegg: C00448
  cas: 13058-04-3
- id: fru
  name: D-Fructose
  formula: C6H12O6
  formula_neutral: C6H12O6
  charge: 0
  kegg: C00095
  cas: 57-48-7
- id: fum
  name: Fumarate
  formula: C4H2O4
  formula_neutral: C4H2O4
  charge: -2
  kegg: C00122
  cas: 110-17-8
- id: g1p
  name: D-Glucose 1-phosphate
  formula: C6H11O9P
  formula_neutral: C6H11O9P
  charge: -2
  kegg: C00103
  cas: 59-56-3
- id: g3p
  name: Glyceraldehyde 3-phosphate
  formula: C3H5O6P
  formula_neutral: C3H5O6P
  charge: -2
  kegg: C00661
  cas: 142-10-9
- id: g6p
  name: D-Glucose 6-phosphate
  formula: C6H11O9P
  formula_neutral: C6H11O9P
  charge: -2
  kegg: C00092
  cas: 56-73-5
- id: gal
  name: D-Galactose
  formula: C6H12O6
  formula_neutral: C6H12O6
  charge: 0
  kegg: C00124
  cas: 59-23-4
- id: gal1p
  name: alpha-D-Galactose 1-phosphate
  formula: C6H11O9P
  formula_neutral: C6H11O9P
  charge: -2
  kegg: C00446
  cas: 2255-14-3
- id: gam1p
  name: D-Glucosamine 1-phosphate
  formula: C6H13NO8P
  formula_neutral: C6H13NO8P
  charge: -1
  kegg: C06156
- id: gam6p
  name: D-Glucosamine 6-phosphate
  formula: C6H13NO8P
  formula_neutral: C6H13NO8P
  charge: -1
  kegg: C00352
  cas: 3616-42-0
- id: gar
  name: N1-(5-Phospho-D-ribosyl)glycinamide
  formula: C7H14N2O8P
  formula_neutral: C7H14N2O8P
  charge: -1
  kegg: C03838
- id: gcald
  name: Glycolaldehyde
  formula: C2H4O2
  formula_neutral: C2H4O2
  charge: 0
  kegg: C00266
- id: gdp
  name: GDP
  formula: C10H12N5O11P2
  formula_neutral: C10H12N5O11P2
  charge: -3
  kegg: C00035
  cas: 146-91-8
- id: gdpddm
  name: GDP-4-dehydro-6-deoxy-D-mannose
  formula: C16H21N5O15P2
  formula_neutral: C16H21N5O15P2
  charge: -2
  kegg: C01222
- id: gdpdp
  name: Guanosine 3',5'-bis(diphosphate)
  formula: C10H11N5O17P4
  formula_neutral: C10H11N5O17P4
  charge: -6
  kegg: C01228
- id: gdpfuc
  name: GDP-L-fucose
  formula: C16H23N5O15P2
  formula_neutral: C16H23N5O15P2
  charge: -2
  kegg: C00325
- id: gdpman
  name: GDP-D-mannose
  formula: C16H23N5O16P2
  formula_neutral: C16H23N5O16P2
  charge: -2
  kegg: C00096
- id: gdptp
  name: Guanosine 3'-diphosphate 5'-triphosphate
  formula: C10H11N5O20P5
  formula_neutral: C10H11N5O20P5
  charge: -7
  kegg: C04494
- id: ggdp
  name: Geranylgeranyl diphosphate
  formula: C20H33O7P2
  formula_neutral: C20H33O7P2
  charge: -3
  kegg: C00353
- id: glc-D
  name: D-Glucose
  formula: C6H12O6
  formula_neutral: C6H12O6
  charge: 0
  kegg: C00031
  cas: 50-99-7
- id: glcdg_CN
  name: Monoglucosyldiacylglycerol (Cyanothece)
  formula: C2124H3814O500
  formula_neutral: C2124H3814O500
  charge: 0
- id: glcn-D
  name: D-Gluconate
  formula: C6H11O7
  formula_neutral: C6H11O7
  charge: -1
  kegg: C00257
  cas: 526-95-4
- id: gln-L
  name: L-Glutamine
  formula: C5H10N2O3
  formula_neutral: C5H10N2O3
  charge: 0
  kegg: C00064
  cas: 56-85-9
- id: glntrna
  name: L-Glutaminyl-tRNA(Gln)
  formula: C5H10N2O3X
  formula_neutral: C5H10N2O3X
  charge: 1
  kegg: C02282
- id: glu-D
  name: D-Glutamate
  formula: C5H8NO4
  formula_neutral: C5H8NO4
  charge: -1
  kegg: C00217
  cas: 56-86-0
- id: glu-L
  name: L-Glutamate
  formula: C5H8NO4
  formula_neutral: C5H8NO4
  charge: -1
  kegg: C00025
  cas: 56-86-0
- id: glu1sa
  name: L-Glutamate 1-semialdehyde
  formula: C5H9NO3
  formula_neutral: C5H9NO3
  charge: 0
  kegg: C03741
- id: glu5p
  name: L-Glutamate 5-phosphate
  formula: C5H8NO7P
  formula_neutral: C5H8NO7P
  charge: -2
  kegg: C03287
- id: glu5sa
  name: L-Glutamate 5-semialdehyde
  formula: C5H9NO3
  formula_neutral: C5H9NO3
  charge: 0
  kegg: C01165
- id: gluala
  name: (5-L-Glutamyl)-L-amino acid
  formula: C8H13N2O5
  formula_neutral: C8H13N2O5
  charge: -1
  kegg: C03740
  cas: 1460-57-7
- id: glucys
  name: gamma-L-Glutamyl-L-cysteine
  formula: C8H13N2O5S
  formula_neutral: C8H13N2O5S
  charge: -1
  kegg: C00669
  cas: 686-58-8
- id: glutrna
  name: L-Glutamyl-tRNA(Glu)
  formula: C5H8NO4X
  formula_neutral: C5H8NO4X
  charge: 0
  kegg: C02987
- id: glutrna_gln
  name: L-Glutamyl-tRNA(Gln)
  formula: C5H8NO4X
  formula_neutral: C5H8NO4X
  charge: 0
- id: glx
  name: Glyoxylate
  formula: C2H1O3
  formula_neutral: C2H1O3
  charge: -1
  kegg: C00048
  cas: 298-12-4
- id: gly
  name: Glycine
  formula: C2H5NO2
  formula_neutral: C2H5NO2
  charge: 0
  kegg: C00037
  cas: 56-40-6
- id: glyald
  name: D-Glyceraldehyde
  formula: C3H6O3
  formula_neutral: C3H6O3
  charge: 0
  kegg: C00577
  cas: 453-17-8
- id: glyc
  name: Glycerol
  formula: C3H8O3
  formula_neutral: C3H8O3
  charge: 0
  kegg: C00116
  cas: 56-81-5
- id: glyc-R
  name: (R)-Glycerate
  formula: C3H5O4
  formula_neutral: C3H5O4
  charge: -1
  kegg: C00258
  cas: 473-81-4
- id: glyc3p
  name: sn-Glycerol 3-phosphate
  formula: C3H7O6P
  formula_neutral: C3H7O6P
  charge: -2
  kegg: C00093
  cas: 57-03-4
- id: glyclt
  name: Glycolate
  formula: C2H3O3
  formula_neutral: C2H3O3
  charge: -1
  kegg: C00160
  cas: 79-14-1
- id: glycogen
  name: Glycogen
  formula: C6H10O5
  formula_neutral: C6H10O5
  charge: 0
  kegg: C00182
- id: glytrna
  name: Glycyl-tRNA(Gly)
  formula: C2H5NO2X
  formula_neutral: C2H5NO2X
  charge: 1
  kegg: C02412
- id: gmh7p
  name: D-Glycero-D-manno-heptose 7-phosphate
  formula: C7H13O10P
  formula_neutral: C7H13O10P
  charge: -2
  kegg: C07836
- id: gmp
  name: GMP
  formula: C10H12N5O8P
  formula_neutral: C10H12N5O8P
  charge: -2
  kegg: C00144
  cas: 85-32-5
- id: grdp
  name: Geranyl diphosphate
  formula: C10H17O7P2
  formula_neutral: C10H17O7P2
  charge: -3
  kegg: C00341
- id: gsn
  name: Guanosine
  formula: C10H13N5O5
  formula_neutral: C10H13N5O5
  charge: 0
  kegg: C00387
  cas: 118-00-3
- id: gthox
  name: Oxidized glutathione
  formula: C20H30N6O12S2
  formula_neutral: C20H30N6O12S2
  charge: -2
  kegg: C00127
- id: gthrd
  name: Reduced glutathione
  formula: C10H16N3O6S
  formula_neutral: C10H16N3O6S
  charge: -1
  kegg: C00051
  cas: 70-18-8
- id: gtp
  name: GTP
  formula: C10H12N5O14P3
  formula_neutral: C10H12N5O14P3
  charge: -4
  kegg: C00044
  cas: 86-01-1
- id: gua
  name: Guanine
  formula: C5H5N5O
  formula_neutral: C5H5N5O
  charge: 0
  kegg: C00242
  cas: 73-40-5
- id: h
  name: H+
  formula: H
  formula_neutral: H
  charge: 1
  kegg: C00080
  cas: 12408-02-5
- id: h2
  name: H2
  formula: H2
  formula_neutral: H2
  charge: 0
  kegg: C00282
  cas: 1333-74-0
- id: h2mb4p
  name: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
  formula: C5H9O8P2
  formula_neutral: C5H9O8P2
  charge: -3
  kegg: C11811
- id: h2o
  name: H2O
  formula: H2O
  formula_neutral: H2O
  charge: 0
  kegg: C00001
  cas: 7732-18-5
- id: h2o2
  name: Hydrogen peroxide
  formula: H2O2
  formula_neutral: H2O2
  charge: 0
  kegg: C00027
  cas: 7722-84-1
- id: h2s
  name: Hydrogen sulfide
  formula: HS
  formula_neutral: HS
  charge: -1
  kegg: C00283
  cas: '2148878'
- id: hcit
  name: Homocitrate
  formula: C7H7O7
  formula_neutral: C7H7O7
  charge: -3
  kegg: C01251
- id: hco3
  name: Bicarbonate
  formula: CHO3
  formula_neutral: CHO3
  charge: -1
  kegg: C00288
  cas: 71-52-3
- id: hcys-L
  name: L-Homocysteine
  formula: C4H9NO2S
  formula_neutral: C4H9NO2S
  charge: 0
  kegg: C00155
  cas: 6027-13-0
- id: hdeacp
  name: Hexadecenoyl-ACP (n-C16:1ACP)
  formula: C16H29OX
  formula_neutral: C16H29OX
  charge: 0
- id: hemeA
  name: Heme A
  formula: C49H54FeN4O6
  formula_neutral: C49H54FeN4O6
  charge: -6
- id: hemeO
  name: Heme O
  formula: C49H56FeN4O5
  formula_neutral: C49H56FeN4O5
  charge: -2
  cas: 137397-56-9
- id: hexacp
  name: Hexanoyl-[acyl-carrier protein]
  formula: C6H11OX
  formula_neutral: C6H11OX
  charge: 0
  kegg: C05749
  cas: '2148941'
- id: hgbam
  name: Hydrogenobyrinate a,c diamide
  formula: C45H58N6O12
  formula_neutral: C45H58N6O12
  charge: -4
  kegg: C06503
- id: hgbyr
  name: Hydrogenobyrinate
  formula: C45H54N4O14
  formula_neutral: C45H54N4O14
  charge: -6
  kegg: C06399
- id: hgentis
  name: Homogentisate
  formula: C8H7O4
  formula_neutral: C8H7O4
  charge: -1
  kegg: C00544
  cas: 451-13-8
- id: his-L
  name: L-Histidine
  formula: C6H9N3O2
  formula_neutral: C6H9N3O2
  charge: 0
  kegg: C00135
  cas: 71-00-1
- id: hisp
  name: L-Histidinol phosphate
  formula: C6H11N3O4P
  formula_neutral: C6H11N3O4P
  charge: -1
  kegg: C01100
  cas: 25679-93-0
- id: histd
  name: L-Histidinol
  formula: C6H12N3O
  formula_neutral: C6H12N3O
  charge: 1
  kegg: C00860
- id: histrna
  name: L-Histidyl-tRNA(His)
  formula: C6H9N3O2X
  formula_neutral: C6H9N3O2X
  charge: 1
  kegg: C02988
- id: hmbil
  name: Hydroxymethylbilane
  formula: C40H38N4O17
  formula_neutral: C40H38N4O17
  charge: -8
  kegg: C01024
  cas: 73023-76-4
- id: hmpme
  name: 13(1)-Hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester
  formula: C35H33MgN4O5
  formula_neutral: C35H33MgN4O5
  charge: 1
  kegg: C11829
- id: hom-L
  name: L-Homoserine
  formula: C4H9NO3
  formula_neutral: C4H9NO3
  charge: 0
  kegg: C00263
  cas: 672-15-1
- id: hpyr
  name: Hydroxypyruvate
  formula: C3H3O4
  formula_neutral: C3H3O4
  charge: -1
  kegg: C00168
  cas: 1113-60-6
- id: hxan
  name: Hypoxanthine
  formula: C5H4N4O
  formula_neutral: C5H4N4O
  charge: 0
  kegg: C00262
  cas: 68-94-0
- id: iasp
  name: Iminoaspartate
  formula: C4H3NO4
  formula_neutral: C4H3NO4
  charge: -2
  kegg: C05840
- id: ichor
  name: Isochorismate
  formula: C10H8O6
  formula_neutral: C10H8O6
  charge: -2
  kegg: C00885
- id: icit
  name: Isocitrate
  formula: C6H5O7
  formula_neutral: C6H5O7
  charge: -3
  kegg: C00311
  cas: 30810-51-6
- id: ile-L
  name: L-Isoleucine
  formula: C6H13NO2
  formula_neutral: C6H13NO2
  charge: 0
  kegg: C00407
  cas: 73-32-5
- id: iletrna
  name: L-Isoleucyl-tRNA(Ile)
  formula: C6H13NO2X
  formula_neutral: C6H13NO2X
  charge: 1
  kegg: C03127
- id: imacp
  name: 3-(Imidazol-4-yl)-2-oxopropyl phosphate
  formula: C6H8N2O5P
  formula_neutral: C6H8N2O5P
  charge: -1
  kegg: C01267
- id: imp
  name: IMP
  formula: C10H11N4O8P
  formula_neutral: C10H11N4O8P
  charge: -2
  kegg: C00130
  cas: 131-99-7
- id: ins
  name: Inosine
  formula: C10H12N4O5
  formula_neutral: C10H12N4O5
  charge: 0
  kegg: C00294
  cas: 58-63-9
- id: ipdp
  name: Isopentenyl diphosphate
  formula: C5H9O7P2
  formula_neutral: C5H9O7P2
  charge: -3
  kegg: C00129
- id: k
  name: K+
  formula: K
  formula_neutral: K
  charge: 1
  kegg: C00238
- id: lac-D
  name: D-Lactate
  formula: C3H5O3
  formula_neutral: C3H5O3
  charge: -1
  kegg: C00256
  cas: 10326-41-7
- id: lac-L
  name: L-Lactate
  formula: C3H5O3
  formula_neutral: C3H5O3
  charge: -1
  kegg: C00186
  cas: 79-33-4
- id: leu-L
  name: L-Leucine
  formula: C6H13NO2
  formula_neutral: C6H13NO2
  charge: 0
  kegg: C00123
  cas: 61-90-5
- id: leutrna
  name: L-Leucyl-tRNA(Leu)
  formula: C6H13NO2X
  formula_neutral: C6H13NO2X
  charge: 1
  kegg: C02047
- id: lgt-S
  name: (R)-S-Lactoylglutathione
  formula: C13H20N3O8S
  formula_neutral: C13H20N3O8S
  charge: -1
  kegg: C03451
  cas: 59-85-8
- id: linlnacp
  name: ocatadecatrienoyl_ACP (n-C18:3_ACP)
  formula: C18H29OX
  formula_neutral: C18H29OX
  charge: 0
- id: lipidAds
  name: Lipid A Disaccharide
  formula: C68H127N2O20P
  formula_neutral: C68H127N2O20P
  charge: -2
  kegg: C04932
- id: lipidX
  name: 2,3-Bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate
  formula: C34H64NO12P
  formula_neutral: C34H64NO12P
  charge: -2
  kegg: C04824
- id: lipid_CN
  name: lipid of Cyanothece 51142
  formula: C2137H3838O542P8S5
  formula_neutral: C2137H3838O542P8S5
  charge: -10
- id: lyc
  name: Lycopene
  formula: C40H56
  formula_neutral: C40H56
  charge: 0
  kegg: C05432
  cas: 502-65-8
- id: lys-L
  name: L-Lysine
  formula: C6H15N2O2
  formula_neutral: C6H15N2O2
  charge: 1
  kegg: C00047
  cas: 56-87-1
- id: lystrna
  name: L-Lysine-tRNA (Lys)
  formula: C6H15N2O2X
  formula_neutral: C6H15N2O2X
  charge: 2
  kegg: C01931
- id: mal-L
  name: L-Malate
  formula: C4H4O5
  formula_neutral: C4H4O5
  charge: -2
  kegg: C00149
  cas: 97-67-6
- id: malacp
  name: Malonyl-[acyl-carrier protein]
  formula: C3H2O3X
  formula_neutral: C3H2O3X
  charge: -1
  kegg: C01209
- id: malcoa
  name: Malonyl-CoA
  formula: C24H33N7O19P3S
  formula_neutral: C24H33N7O19P3S
  charge: -5
  kegg: C00083
  cas: 524-14-1
- id: man1p
  name: D-Mannose 1-phosphate
  formula: C6H11O9P
  formula_neutral: C6H11O9P
  charge: -2
  kegg: C03812
- id: man6p
  name: D-Mannose 6-phosphate
  formula: C6H11O9P
  formula_neutral: C6H11O9P
  charge: -2
  kegg: C00275
- id: met-D
  name: D-Methionine
  formula: C5H11NO2S
  formula_neutral: C5H11NO2S
  charge: 0
  kegg: C00855
  cas: 348-67-4
- id: met-L
  name: L-Methionine
  formula: C5H11NO2S
  formula_neutral: C5H11NO2S
  charge: 0
  kegg: C00073
  cas: 63-68-3
- id: methf
  name: 5,10-Methenyltetrahydrofolate
  formula: C20H20N7O6
  formula_neutral: C20H20N7O6
  charge: -1
  kegg: C00445
- id: mettrna
  name: L-Methionyl-tRNA (Met)
  formula: C5H11NO2SX
  formula_neutral: C5H11NO2SX
  charge: 1
  kegg: C02430
- id: mg2
  name: Mg
  formula: Mg
  formula_neutral: Mg
  charge: 2
  kegg: C00305
- id: mgdg_CN
  name: Monogalactosyldiacylglycerol (Cyanothece)
  formula: C2124H3814O500
  formula_neutral: C2124H3814O500
  charge: 0
- id: mgppp9
  name: Magnesium protoporphyrin
  formula: C34H30MgN4O4
  formula_neutral: C34H30MgN4O4
  charge: 0
  kegg: C03516
  cas: 15985-39-4
- id: mgpppmme
  name: Magnesium protoporphyrin monomethyl ester
  formula: C35H33MgN4O4
  formula_neutral: C35H33MgN4O4
  charge: 1
  kegg: C04536
  cas: 652-69-7
- id: mlthf
  name: 5,10-Methylenetetrahydrofolate
  formula: C20H21N7O6
  formula_neutral: C20H21N7O6
  charge: -2
  kegg: C00143
- id: mn2
  name: Mn2+
  formula: Mn
  formula_neutral: Mn
  charge: 2
  kegg: C00034
- id: mobd
  name: Molybdate
  formula: MoO4
  formula_neutral: MoO4
  charge: -2
  kegg: C06232
  cas: 14259-85-9
- id: msbq
  name: 2-methyl-6-solanyl-1,4-benzoquinone
  formula: C52H80O2
  formula_neutral: C52H80O2
  charge: 0
- id: mthgxl
  name: Methylglyoxal
  formula: C3H4O2
  formula_neutral: C3H4O2
  charge: 0
  kegg: C00546
  cas: 78-98-8
- id: mvpc
  name: monovinyl protochlorophyllide a
  formula: C35H31N4O5Mg
  formula_neutral: C35H31N4O5Mg
  charge: 1
- id: myrsacp
  name: Myristoyl-ACP (n-C14:0ACP)
  formula: C14H27OX
  formula_neutral: C14H27OX
  charge: 0
- id: n2
  name: N2
  formula: N2
  formula_neutral: N2
  charge: 0
  kegg: C00697
  cas: 7727-37-9
- id: na1
  name: Sodium
  formula: Na
  formula_neutral: Na
  charge: 1
  kegg: C01330
  cas: 7440-23-5
- id: nac
  name: Nicotinate
  formula: C6H4NO2
  formula_neutral: C6H4NO2
  charge: -1
  kegg: C00253
  cas: 59-67-6
- id: nad
  name: Nicotinamide adenine dinucleotide
  formula: C21H26N7O14P2
  formula_neutral: C21H26N7O14P2
  charge: -1
  kegg: C00003
  cas: 53-84-9
- id: nadh
  name: Nicotinamide adenine dinucleotide - reduced
  formula: C21H27N7O14P2
  formula_neutral: C21H27N7O14P2
  charge: -2
  kegg: C00004
  cas: 53-84-9
- id: nadp
  name: Nicotinamide adenine dinucleotide phosphate
  formula: C21H25N7O17P3
  formula_neutral: C21H25N7O17P3
  charge: -3
  kegg: C00006
  cas: 53-59-8
- id: nadph
  name: Nicotinamide adenine dinucleotide phosphate - reduced
  formula: C21H26N7O17P3
  formula_neutral: C21H26N7O17P3
  charge: -4
  kegg: C00005
  cas: 2646-71-1
- id: ncam
  name: Nicotinamide
  formula: C6H6N2O
  formula_neutral: C6H6N2O
  charge: 0
  kegg: C00153
  cas: 98-92-0
- id: nh4
  name: Ammonium
  formula: H4N
  formula_neutral: H4N
  charge: 1
  kegg: C01342
- id: ni2
  name: Ni2+
  formula: Ni
  formula_neutral: Ni
  charge: 2
  kegg: C00291
- id: nicrnt
  name: Nicotinate D-ribonucleotide
  formula: C11H12NO9P
  formula_neutral: C11H12NO9P
  charge: -2
  kegg: C01185
- id: nmn
  name: NMN
  formula: C11H14N2O8P
  formula_neutral: C11H14N2O8P
  charge: -1
  kegg: C00455
  cas: 1094-61-7
- id: 'no'
  name: Nitric oxide
  formula: 'NO'
  formula_neutral: 'NO'
  charge: 0
  kegg: C00533
  cas: 10102-43-9
- id: no2
  name: Nitrite
  formula: NO2
  formula_neutral: NO2
  charge: -1
  kegg: C00088
  cas: 7697-37-2
- id: no3
  name: Nitrate
  formula: NO3
  formula_neutral: NO3
  charge: -1
  kegg: C00244
- id: nondp
  name: all-trans-Nonaprenyl diphosphate
  formula: C45H73O7P2
  formula_neutral: C45H73O7P2
  charge: -3
  kegg: C04145
- id: nspr
  name: Neurosporene
  formula: C40H58
  formula_neutral: C40H58
  charge: 0
  kegg: C05431
  cas: 1253-84-5
- id: o2
  name: O2
  formula: O2
  formula_neutral: O2
  charge: 0
  kegg: C00007
  cas: 7782-44-7
- id: o2-
  name: Superoxide
  formula: O2
  formula_neutral: O2
  charge: -1
  kegg: C00704
- id: oaa
  name: Oxaloacetate
  formula: C4H2O5
  formula_neutral: C4H2O5
  charge: -2
  kegg: C00036
  cas: 328-42-7
- id: ocdacp
  name: Octadecanoyl-ACP (n-C18:0ACP)
  formula: C18H35OX
  formula_neutral: C18H35OX
  charge: 0
- id: ocdcyaacp
  name: Octadecynoyl-ACP (n-C18:2ACP)
  formula: C18H31OX
  formula_neutral: C18H31OX
  charge: 0
- id: octacp
  name: Octanoyl-[acyl-carrier protein]
  formula: C8H15OX
  formula_neutral: C8H15OX
  charge: 0
  kegg: C05752
  cas: '2148941'
- id: octeacp
  name: Octadecenoyl-ACP (n-C18:1ACP)
  formula: C18H33OX
  formula_neutral: C18H33OX
  charge: 0
  kegg: C01203
- id: ohpb
  name: 2-Oxo-3-hydroxy-4-phosphobutanoate
  formula: C4H4O8P
  formula_neutral: C4H4O8P
  charge: -3
  kegg: C06054
- id: ompme
  name: 13(1)-Oxo-magnesium-protoporphyrin IX 13-monomethyl ester
  formula: C35H31MgN4O5
  formula_neutral: C35H31MgN4O5
  charge: 1
  kegg: C11830
- id: orn-L
  name: L-Ornithine
  formula: C5H13N2O2
  formula_neutral: C5H13N2O2
  charge: 1
  kegg: C00077
  cas: 70-26-8
- id: orot
  name: Orotate
  formula: C5H3N2O4
  formula_neutral: C5H3N2O4
  charge: -1
  kegg: C00295
  cas: 65-86-1
- id: orot5p
  name: Orotidine 5'-phosphate
  formula: C10H10N2O11P
  formula_neutral: C10H10N2O11P
  charge: -3
  kegg: C01103
  cas: 2149-82-8
- id: pa_CN
  name: phosphatidate (Cyanothece)
  formula: C1824H3264O400P50
  formula_neutral: C1824H3264O400P50
  charge: -100
- id: palmacp
  name: Palmitoyl-ACP (n-C16:0ACP)
  formula: C16H31OX
  formula_neutral: C16H31OX
  charge: 0
- id: pan4p
  name: Pantetheine 4'-phosphate
  formula: C11H21N2O7PS
  formula_neutral: C11H21N2O7PS
  charge: -2
  kegg: C01134
- id: pant-R
  name: (R)-Pantoate
  formula: C6H11O4
  formula_neutral: C6H11O4
  charge: -1
  kegg: C00522
  cas: 470-29-1
- id: pap
  name: Adenosine 3',5'-bisphosphate
  formula: C10H11N5O10P2
  formula_neutral: C10H11N5O10P2
  charge: -4
  kegg: C00054
  cas: 1053-73-2
- id: paps
  name: 3'-Phosphoadenylyl sulfate
  formula: C10H11N5O13P2S
  formula_neutral: C10H11N5O13P2S
  charge: -4
  kegg: C00053
  cas: 482-67-7
- id: pdx5p
  name: Pyridoxine 5'-phosphate
  formula: C8H10NO6P
  formula_neutral: C8H10NO6P
  charge: -2
  kegg: C00627
  cas: 447-05-2
- id: pep
  name: Phosphoenolpyruvate
  formula: C3H2O6P
  formula_neutral: C3H2O6P
  charge: -3
  kegg: C00074
  cas: 138-08-9
- id: pgly_CN
  name: Phosphotidylglycerol (Cyanothece)
  formula: C1974H3614O500P50
  formula_neutral: C1974H3614O500P50
  charge: -50
- id: pglyp_CN
  name: Phosphatidylglycerolphosphate (Cyanothece)
  formula: C1974H3564O650P100
  formula_neutral: C1974H3564O650P100
  charge: -150
- id: phdp
  name: Phytyl diphosphate
  formula: C20H39O7P2
  formula_neutral: C20H39O7P2
  charge: -3
  kegg: C05427
- id: phe-L
  name: L-Phenylalanine
  formula: C9H11NO2
  formula_neutral: C9H11NO2
  charge: 0
  kegg: C00079
  cas: 63-91-2
- id: pheme
  name: Protoheme
  formula: C34H31FeN4O4
  formula_neutral: C34H31FeN4O4
  charge: -1
  kegg: C00032
  cas: 14875-96-8
- id: phetrna
  name: L-Phenylalanyl-tRNA(Phe)
  formula: C9H11NO2X
  formula_neutral: C9H11NO2X
  charge: 1
  kegg: C03511
- id: phom
  name: O-Phospho-L-homoserine
  formula: C4H8NO6P
  formula_neutral: C4H8NO6P
  charge: -2
  kegg: C01102
- id: photon_PSI
  name: Photosystem I photon
  formula: X
  formula_neutral: X
  charge: 0
- id: photon_PSII
  name: Photosystem II photon
  formula: X
  formula_neutral: X
  charge: 0
- id: phpyr
  name: Phenylpyruvate
  formula: C9H7O3
  formula_neutral: C9H7O3
  charge: -1
  kegg: C00166
  cas: 156-06-9
- id: phq
  name: Phylloquinone
  formula: C31H46O2
  formula_neutral: C31H46O2
  charge: 0
  kegg: C02059
- id: phthr
  name: O-Phospho-4-hydroxy-L-threonine
  formula: C4H8NO7P
  formula_neutral: C4H8NO7P
  charge: -2
  kegg: C06055
  cas: 598-35-6
- id: pi
  name: Phosphate
  formula: HO4P
  formula_neutral: HO4P
  charge: -2
  kegg: C00009
  cas: 14265-44-2
- id: pmcoa
  name: Pimeloyl-CoA
  formula: C28H41N7O19P3S
  formula_neutral: C28H41N7O19P3S
  charge: -5
  kegg: C01063
- id: pnto-R
  name: (R)-Pantothenate
  formula: C9H16NO5
  formula_neutral: C9H16NO5
  charge: -1
  kegg: C00864
  cas: 79-83-4
- id: ppa
  name: Propionate
  formula: C3H5O2
  formula_neutral: C3H5O2
  charge: -1
  kegg: C00163
  cas: 79-09-4
- id: ppap
  name: Propanoyl phosphate
  formula: C3H5O5P
  formula_neutral: C3H5O5P
  charge: -2
  kegg: C02876
  cas: 121-69-7
- id: ppbng
  name: Porphobilinogen
  formula: C10H13N2O4
  formula_neutral: C10H13N2O4
  charge: -1
  kegg: C00931
  cas: 487-90-1
- id: ppcoa
  name: Propanoyl-CoA
  formula: C24H36N7O17P3S
  formula_neutral: C24H36N7O17P3S
  charge: -4
  kegg: C00100
  cas: 317-66-8
- id: pphn
  name: Prephenate
  formula: C10H8O6
  formula_neutral: C10H8O6
  charge: -2
  kegg: C00254
  cas: 126-49-8
- id: ppi
  name: Diphosphate
  formula: HO7P2
  formula_neutral: HO7P2
  charge: -3
  kegg: C00013
  cas: '206975'
- id: ppp9
  name: Protoporphyrin
  formula: C34H32N4O4
  formula_neutral: C34H32N4O4
  charge: -2
  kegg: C02191
  cas: 553-12-8
- id: pppg9
  name: Protoporphyrinogen IX
  formula: C34H38N4O4
  formula_neutral: C34H38N4O4
  charge: -2
  kegg: C01079
- id: pppi
  name: Inorganic triphosphate
  formula: HO10P3
  formula_neutral: HO10P3
  charge: -4
  kegg: C03279
- id: pptdp
  name: Prephytoene diphosphate
  formula: C40H65O7P2
  formula_neutral: C40H65O7P2
  charge: -3
  kegg: C03427
  cas: 112-62-9
- id: pq9
  name: Plastoquinone-9
  formula: C53H80O2
  formula_neutral: C53H80O2
  charge: 0
  cas: 4299-57-4
- id: pq9h2
  name: Plastoquinol-9
  formula: C53H82O2
  formula_neutral: C53H82O2
  charge: 0
- id: pram
  name: 5-Phospho-beta-D-ribosylamine
  formula: C5H11NO7P
  formula_neutral: C5H11NO7P
  charge: -1
  kegg: C03090
- id: pran
  name: N-(5-Phospho-D-ribosyl)anthranilate
  formula: C12H13NO9P
  formula_neutral: C12H13NO9P
  charge: -3
  kegg: C04302
- id: prbamp
  name: 1-(5-Phosphoribosyl)-AMP
  formula: C15H19N5O14P2
  formula_neutral: C15H19N5O14P2
  charge: -4
  kegg: C02741
- id: prbatp
  name: 1-(5-Phosphoribosyl)-ATP
  formula: C15H19N5O20P4
  formula_neutral: C15H19N5O20P4
  charge: -6
  kegg: C02739
- id: pre3a
  name: Precorrin 3 A
  formula: C43H43N4O16
  formula_neutral: C43H43N4O16
  charge: -7
  kegg: C05772
- id: pre3b
  name: Precorrin 3B
  formula: C43H44N4O17
  formula_neutral: C43H44N4O17
  charge: -6
  kegg: C06406
- id: pre4
  name: Precorrin 4
  formula: C44H44N4O17
  formula_neutral: C44H44N4O17
  charge: -8
  kegg: C06407
- id: pre5
  name: Precorrin 5
  formula: C45H46N4O17
  formula_neutral: C45H46N4O17
  charge: -8
  kegg: C06416
- id: pre6a
  name: Precorrin 6A
  formula: C44H47N4O16
  formula_neutral: C44H47N4O16
  charge: -7
  kegg: C06320
- id: pre6b
  name: Precorrin 6B
  formula: C44H49N4O16
  formula_neutral: C44H49N4O16
  charge: -7
  kegg: C06319
- id: pre8
  name: Precorrin 8
  formula: C45H53N4O14
  formula_neutral: C45H53N4O14
  charge: -7
  kegg: C06408
- id: prfp
  name: 1-(5-Phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
  formula: C15H22N5O15P2
  formula_neutral: C15H22N5O15P2
  charge: -3
  kegg: C04896
- id: prlp
  name: 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide
  formula: C15H22N5O15P2
  formula_neutral: C15H22N5O15P2
  charge: -3
  kegg: C04916
- id: pro-L
  name: L-Proline
  formula: C5H9NO2
  formula_neutral: C5H9NO2
  charge: 0
  kegg: C00148
  cas: 147-85-3
- id: protein_CN
  name: Average protein of Cyanothece 51142
  formula: C50611H79595N13434O14897S302
  formula_neutral: C50611H79595N13434O14897S302
  charge: -157
- id: protrna
  name: L-Prolyl-tRNA(Pro)
  formula: C5H9NO2X
  formula_neutral: C5H9NO2X
  charge: 1
  kegg: C02702
- id: prpp
  name: 5-Phospho-alpha-D-ribose 1-diphosphate
  formula: C5H8O14P3
  formula_neutral: C5H8O14P3
  charge: -5
  kegg: C00119
- id: psd5p
  name: Pseudouridine 5'-phosphate
  formula: C9H11N2O9P
  formula_neutral: C9H11N2O9P
  charge: -2
  kegg: C01168
  cas: 1157-60-4
- id: pser-L
  name: O-Phospho-L-serine
  formula: C3H6NO6P
  formula_neutral: C3H6NO6P
  charge: -2
  kegg: C01005
  cas: 407-41-0
- id: ptn
  name: Phytoene
  formula: C40H64
  formula_neutral: C40H64
  charge: 0
  kegg: C05413
  cas: 583-08-4
- id: pyam5p
  name: Pyridoxamine 5'-phosphate
  formula: C8H11N2O5P
  formula_neutral: C8H11N2O5P
  charge: -2
  kegg: C00647
  cas: 529-96-4
- id: pydx5p
  name: Pyridoxal 5'-phosphate
  formula: C8H7NO6P
  formula_neutral: C8H7NO6P
  charge: -3
  kegg: C00018
  cas: 54-47-7
- id: pyf
  name: Phytofluene
  formula: C40H62
  formula_neutral: C40H62
  charge: 0
  kegg: C05414
  cas: 583-08-4
- id: pyr
  name: Pyruvate
  formula: C3H3O3
  formula_neutral: C3H3O3
  charge: -1
  kegg: C00022
  cas: 127-17-3
- id: quln
  name: Quinolinate
  formula: C7H3NO4
  formula_neutral: C7H3NO4
  charge: -2
  kegg: C03722
  cas: 89-00-9
- id: r1p
  name: alpha-D-Ribose 1-phosphate
  formula: C5H9O8P
  formula_neutral: C5H9O8P
  charge: -2
  kegg: C00442
  cas: 58459-37-3
- id: r5p
  name: alpha-D-Ribose 5-phosphate
  formula: C5H9O8P
  formula_neutral: C5H9O8P
  charge: -2
  kegg: C00117
  cas: 4300-28-1
- id: rb15bp
  name: D-Ribulose 1,5-bisphosphate
  formula: C5H8O11P2
  formula_neutral: C5H8O11P2
  charge: -4
  kegg: C01182
  cas: 24218-00-6
- id: rdmbzi
  name: N1-(alpha-D-ribosyl)-5,6-dimethylbenzimidazole
  formula: C14H18N2O4
  formula_neutral: C14H18N2O4
  charge: 0
  kegg: C05775
- id: rib-D
  name: D-Ribose
  formula: C5H10O5
  formula_neutral: C5H10O5
  charge: 0
  kegg: C00121
  cas: 50-69-1
- id: ribflv
  name: Riboflavin
  formula: C17H20N4O6
  formula_neutral: C17H20N4O6
  charge: 0
  kegg: C00255
  cas: 83-88-5
- id: rna_CN
  name: RNA, Cyanothece 51142
  formula: C950H1069N369O700P100
  formula_neutral: C950H1069N369O700P100
  charge: -100
- id: rnam
  name: N-Ribosylnicotinamide
  formula: C11H15N2O5
  formula_neutral: C11H15N2O5
  charge: 1
  kegg: C03150
- id: ru5p-D
  name: D-Ribulose 5-phosphate
  formula: C5H9O8P
  formula_neutral: C5H9O8P
  charge: -2
  kegg: C00199
  cas: 4151-19-3
- id: s17bp
  name: Sedoheptulose 1,7-bisphosphate
  formula: C7H12O13P2
  formula_neutral: C7H12O13P2
  charge: -4
  kegg: C00447
- id: s7p
  name: Sedoheptulose 7-phosphate
  formula: C7H13O10P
  formula_neutral: C7H13O10P
  charge: -2
  kegg: C00281
- id: sbzcoa
  name: O-Succinylbenzoyl-CoA
  formula: C32H39N7O20P3S
  formula_neutral: C32H39N7O20P3S
  charge: -5
  kegg: C03160
- id: ser-L
  name: L-Serine
  formula: C3H7NO3
  formula_neutral: C3H7NO3
  charge: 0
  kegg: C00065
  cas: 56-45-1
- id: sertrna
  name: L-Seryl-tRNA(Ser)
  formula: C3H7NO3X
  formula_neutral: C3H7NO3X
  charge: 1
  kegg: C02553
- id: shcl
  name: Dihydrosirohydrochlorin
  formula: C42H40N4O16
  formula_neutral: C42H40N4O16
  charge: -8
  kegg: C02463
  cas: 65207-12-7
- id: skm
  name: Shikimate
  formula: C7H9O5
  formula_neutral: C7H9O5
  charge: -1
  kegg: C00493
  cas: 138-59-0
- id: skm5p
  name: Shikimate 5-phosphate
  formula: C7H8O8P
  formula_neutral: C7H8O8P
  charge: -3
  kegg: C03175
- id: so3
  name: Sulfite
  formula: O3S
  formula_neutral: O3S
  charge: -2
  kegg: C00094
  cas: 7782-99-2
- id: so4
  name: Sulfate
  formula: O4S
  formula_neutral: O4S
  charge: -2
  kegg: C00059
  cas: 7664-93-9
- id: sqdg_CN
  name: Sulfoquinovosyldiacylglycerol (Cyanothece)
  formula: C2124H3764O600S50
  formula_neutral: C2124H3764O600S50
  charge: -50
- id: sql
  name: Squalene
  formula: C30H50
  formula_neutral: C30H50
  charge: 0
  kegg: C00751
  cas: 111-02-4
- id: sucbz
  name: o-Succinylbenzoate
  formula: C11H8O5
  formula_neutral: C11H8O5
  charge: -2
  kegg: C02730
- id: succ
  name: Succinate
  formula: C4H4O4
  formula_neutral: C4H4O4
  charge: -2
  kegg: C00042
  cas: 110-15-6
- id: succoa
  name: Succinyl-CoA
  formula: C25H35N7O19P3S
  formula_neutral: C25H35N7O19P3S
  charge: -5
  kegg: C00091
  cas: 604-98-8
- id: sucephcc
  name: 2-Succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate
  formula: C14H13O9
  formula_neutral: C14H13O9
  charge: -3
  kegg: C16519
- id: sucsal
  name: Succinic semialdehyde
  formula: C4H5O3
  formula_neutral: C4H5O3
  charge: -1
  kegg: C00232
  cas: 692-29-5
- id: tcggrpp
  name: trans,trans,cis-Geranylgeranyl pyrophosphate
  formula: C20H33O7P2
  formula_neutral: C20H33O7P2
  charge: -3
  kegg: C11356
- id: tdeacp
  name: Tetradecenoyl-ACP (n-C14:1ACP)
  formula: C14H25OX
  formula_neutral: C14H25OX
  charge: 0
- id: thdp
  name: 2,3,4,5-Tetrahydrodipicolinate
  formula: C7H7NO4
  formula_neutral: C7H7NO4
  charge: -2
  kegg: C03972
  cas: 52-52-8
- id: thf
  name: 5,6,7,8-Tetrahydrofolate
  formula: C19H21N7O6
  formula_neutral: C19H21N7O6
  charge: -2
  kegg: C00101
  cas: 135-16-0
- id: thglu
  name: Tetrahydropteroyltri-L-glutamate
  formula: C24H32N8O12
  formula_neutral: C24H32N8O12
  charge: -2
  kegg: C04144
- id: thmmp
  name: Thiamin monophosphate
  formula: C12H16N4O4PS
  formula_neutral: C12H16N4O4PS
  charge: -1
  kegg: C01081
  cas: 532-40-1
- id: thmpp
  name: Thiamine diphosphate
  formula: C12H16N4O7P2S
  formula_neutral: C12H16N4O7P2S
  charge: -2
  kegg: C00068
  cas: 154-87-0
- id: thr-L
  name: L-Threonine
  formula: C4H9NO3
  formula_neutral: C4H9NO3
  charge: 0
  kegg: C00188
  cas: 72-19-5
- id: thrp
  name: L-Threonine O-3-phosphate
  formula: C4H8NO6P
  formula_neutral: C4H8NO6P
  charge: -2
  kegg: C12147
- id: thrtrna
  name: L-Threonyl-tRNA(Thr)
  formula: C4H9NO3X
  formula_neutral: C4H9NO3X
  charge: 1
  kegg: C02992
- id: thym
  name: Thymine
  formula: C5H6N2O2
  formula_neutral: C5H6N2O2
  charge: 0
  kegg: C00178
  cas: 65-71-4
- id: thymd
  name: Thymidine
  formula: C10H14N2O5
  formula_neutral: C10H14N2O5
  charge: 0
  kegg: C00214
  cas: 50-89-5
- id: trdox
  name: Oxidized thioredoxin
  formula: X
  formula_neutral: X
  charge: 0
  kegg: C00343
- id: trdrd
  name: Reduced thioredoxin
  formula: XH2
  formula_neutral: XH2
  charge: 0
  kegg: C00342
- id: tre6p
  name: alpha,alpha'-Trehalose 6-phosphate
  formula: C12H21O14P
  formula_neutral: C12H21O14P
  charge: -2
  kegg: C00689
  cas: 4484-88-2
- id: trnaala
  name: tRNA(Ala)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01635
- id: trnaarg
  name: tRNA(Arg)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01636
- id: trnaasn
  name: tRNA(Asn)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01637
- id: trnaasp
  name: tRNA(Asp)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01638
- id: trnacys
  name: tRNA(Cys)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01639
- id: trnagln
  name: tRNA(Gln)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01640
- id: trnaglu
  name: tRNA (Glu)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01641
- id: trnagly
  name: tRNA(Gly)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01642
- id: trnahis
  name: tRNA(His)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01643
- id: trnaile
  name: tRNA(Ile)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01644
- id: trnaleu
  name: tRNA(Leu)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01645
- id: trnalys
  name: tRNA(Lys)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01646
- id: trnamet
  name: tRNA(Met)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01647
- id: trnaphe
  name: tRNA(Phe)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01648
- id: trnapro
  name: tRNA(Pro)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01649
- id: trnaser
  name: tRNA(Ser)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01650
- id: trnathr
  name: tRNA(Thr)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01651
- id: trnatrp
  name: tRNA(Trp)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01652
- id: trnatyr
  name: tRNA(Tyr)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C00787
- id: trnaval
  name: tRNA(Val)
  formula: HOX
  formula_neutral: HOX
  charge: 0
  kegg: C01653
- id: trp-L
  name: L-Tryptophan
  formula: C11H12N2O2
  formula_neutral: C11H12N2O2
  charge: 0
  kegg: C00078
  cas: 73-22-3
- id: trptrna
  name: L-Tryptophanyl-tRNA(Trp)
  formula: C11H12N2O2X
  formula_neutral: C11H12N2O2X
  charge: 1
  kegg: C03512
- id: tyr-L
  name: L-Tyrosine
  formula: C9H11NO3
  formula_neutral: C9H11NO3
  charge: 0
  kegg: C00082
  cas: 60-18-4
- id: tyrtrna
  name: L-Tyrosyl-tRNA(Tyr)
  formula: C9H11NO3X
  formula_neutral: C9H11NO3X
  charge: 1
  kegg: C02839
- id: u23ga
  name: UDP-2,3-bis(3-hydroxytetradecanoyl)glucosamine
  formula: C43H75N3O20P2
  formula_neutral: C43H75N3O20P2
  charge: -2
  kegg: C04652
- id: u3aga
  name: UDP-3-O-(3-hydroxytetradecanoyl)-N-acetylglucosamine
  formula: C31H51N3O19P2
  formula_neutral: C31H51N3O19P2
  charge: -2
  kegg: C04738
- id: u3hga
  name: UDP-3-O-(3-hydroxytetradecanoyl)-D-glucosamine
  formula: C29H50N3O18P2
  formula_neutral: C29H50N3O18P2
  charge: -1
  kegg: C06022
- id: uaagmda
  name: Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
  formula: C95H152N8O28P2
  formula_neutral: C95H152N8O28P2
  charge: -4
  kegg: C05898
- id: uaccg
  name: UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine
  formula: C20H26N3O19P2
  formula_neutral: C20H26N3O19P2
  charge: -3
  kegg: C04631
- id: uacgam
  name: UDP-N-acetyl-D-glucosamine
  formula: C17H25N3O17P2
  formula_neutral: C17H25N3O17P2
  charge: -2
  kegg: C00043
- id: uacmam
  name: UDP-N-acetyl-D-mannosamine
  formula: C17H25N3O17P2
  formula_neutral: C17H25N3O17P2
  charge: -2
  kegg: C01170
- id: uagmda
  name: Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
  formula: C87H139N7O23P2
  formula_neutral: C87H139N7O23P2
  charge: -4
  kegg: C05897
- id: uama
  name: UDP-N-acetylmuramoyl-L-alanine
  formula: C23H33N4O20P2
  formula_neutral: C23H33N4O20P2
  charge: -3
  kegg: C01212
- id: uamag
  name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
  formula: C28H39N5O23P2
  formula_neutral: C28H39N5O23P2
  charge: -4
  kegg: C00692
- id: uamr
  name: UDP-N-acetylmuramate
  formula: C20H28N3O19P2
  formula_neutral: C20H28N3O19P2
  charge: -3
  kegg: C01050
- id: udcpdp
  name: Undecaprenyl diphosphate
  formula: C55H89O7P2
  formula_neutral: C55H89O7P2
  charge: -3
  kegg: C03543
- id: udcpp
  name: Undecaprenyl phosphate
  formula: C55H89O4P
  formula_neutral: C55H89O4P
  charge: -2
  kegg: C00348
- id: udp
  name: UDP
  formula: C9H11N2O12P2
  formula_neutral: C9H11N2O12P2
  charge: -3
  kegg: C00015
  cas: 58-98-0
- id: udpg
  name: UDPglucose
  formula: C15H22N2O17P2
  formula_neutral: C15H22N2O17P2
  charge: -2
  kegg: C00029
- id: udpgal
  name: UDPgalactose
  formula: C15H22N2O17P2
  formula_neutral: C15H22N2O17P2
  charge: -2
  kegg: C00052
- id: udpglcur
  name: UDP-D-glucuronate
  formula: C15H19N2O18P2
  formula_neutral: C15H19N2O18P2
  charge: -3
  kegg: C00167
- id: udpsq
  name: UDP-6-sulfoquinovose
  formula: C15H21N2O19P2S
  formula_neutral: C15H21N2O19P2S
  charge: -3
  kegg: C11521
- id: ugmd
  name: UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate
  formula: C35H51N7O26P2
  formula_neutral: C35H51N7O26P2
  charge: -4
  kegg: C04877
- id: ugmda
  name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
  formula: C41H61N9O28P2
  formula_neutral: C41H61N9O28P2
  charge: -4
  kegg: C04882
- id: ump
  name: UMP
  formula: C9H11N2O9P
  formula_neutral: C9H11N2O9P
  charge: -2
  kegg: C00105
  cas: 58-97-9
- id: uppg3
  name: Uroporphyrinogen III
  formula: C40H36N4O16
  formula_neutral: C40H36N4O16
  charge: -8
  kegg: C01051
  cas: 1976-85-8
- id: ura
  name: Uracil
  formula: C4H4N2O2
  formula_neutral: C4H4N2O2
  charge: 0
  kegg: C00106
  cas: 66-22-8
- id: urate
  name: Urate
  formula: C5H4N4O3
  formula_neutral: C5H4N4O3
  charge: 0
  kegg: C00366
  cas: 69-93-2
- id: uri
  name: Uridine
  formula: C9H12N2O6
  formula_neutral: C9H12N2O6
  charge: 0
  kegg: C00299
  cas: 58-96-8
- id: utp
  name: UTP
  formula: C9H11N2O15P3
  formula_neutral: C9H11N2O15P3
  charge: -4
  kegg: C00075
  cas: 63-39-8
- id: val-L
  name: L-Valine
  formula: C5H11NO2
  formula_neutral: C5H11NO2
  charge: 0
  kegg: C00183
  cas: 72-18-4
- id: valtrna
  name: L-Valyl-tRNA(Val)
  formula: C5H11NO2X
  formula_neutral: C5H11NO2X
  charge: 1
  kegg: C02554
- id: wo4
  name: tungstate
  formula: WO4
  formula_neutral: WO4
  charge: -2
- id: xan
  name: Xanthine
  formula: C5H4N4O2
  formula_neutral: C5H4N4O2
  charge: 0
  kegg: C00385
  cas: 69-89-6
- id: xmp
  name: Xanthosine 5'-phosphate
  formula: C10H11N4O9P
  formula_neutral: C10H11N4O9P
  charge: -2
  kegg: C00655
  cas: 523-98-8
- id: xtsn
  name: Xanthosine
  formula: C10H12N4O6
  formula_neutral: C10H12N4O6
  charge: 0
  kegg: C01762
  cas: 146-80-5
- id: xu5p-D
  name: D-Xylulose 5-phosphate
  formula: C5H9O8P
  formula_neutral: C5H9O8P
  charge: -2
  kegg: C00231
- id: zcar
  name: zeta-Carotene
  formula: C40H60
  formula_neutral: C40H60
  charge: 0
  kegg: C05430
  cas: 1253-84-5
- id: zn2
  name: Zinc
  formula: Zn
  formula_neutral: Zn
  charge: 2
  kegg: C00038
  cas: 7440-66-6