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I also receive errors when trying to run estAvgError.R. These error messages differ whether I run the following command on a computing cluster or locally:
Rscript DSTAT angsdFile="bam.ABBABABA" out="result" sizeFile=”sizeFile.size” nameFile=”popNames.name”
When I try to run the following command on the computing cluster, I get:
-bash: /data100/software/ANGSD/v0.929/bin/angsd/R/: Not a directory
When I try to run the same command locally on my laptop, I get the following error:
Hi All,
I am using ANGSD to perform multipop ABBA-BABA test.
I was able to run -doAbbababa2 but have issues when I run estAvgError.R R script.
I get the following error
"Error in seq.default(1, lenList, numComb) : wrong sign in 'by' argument
Calls: seq -> seq.default
Execution halted"
I am not sure how to resolve this issue.
Thank you very much for your help.
Regards
SITI
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