Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

angsd: realloc() error #621

Open
iremdnzl opened this issue May 13, 2024 · 0 comments
Open

angsd: realloc() error #621

iremdnzl opened this issue May 13, 2024 · 0 comments

Comments

@iremdnzl
Copy link

iremdnzl commented May 13, 2024

Hi, I get this error and I have no idea why. Could you help please?

*** Error in `angsd': realloc(): invalid next size: 0x00000000020fbea0 ***
======= Backtrace: =========
/usr/lib64/libc.so.6(+0x7f474)[0x7f56fc473474]
/usr/lib64/libc.so.6(+0x84861)[0x7f56fc478861]
/usr/lib64/libc.so.6(realloc+0x1d2)[0x7f56fc479e12]
angsd[0x497f84]
angsd[0x498047]
angsd[0x4103be]
angsd[0x4931b4]
angsd[0x490804]
angsd[0x490945]
angsd[0x406ca3]
/usr/lib64/libc.so.6(__libc_start_main+0xf5)[0x7f56fc416555]
angsd[0x4071c1]
======= Memory map: ========
00400000-00596000 r-xp 00000000 00:2a 193511801492 /export/home4/2762262d/MAIN/tools/angsd/angsd
00795000-00796000 r--p 00195000 00:2a 193511801492 /export/home4/2762262d/MAIN/tools/angsd/angsd
00796000-0079c000 rw-p 00196000 00:2a 193511801492 /export/home4/2762262d/MAIN/tools/angsd/angsd
0079c000-00c7c000 rw-p 00000000 00:00 0
020d2000-0211d000 rw-p 00000000 00:00 0 [heap]
7f56f0000000-7f56f0021000 rw-p 00000000 00:00 0
7f56f0021000-7f56f4000000 ---p 00000000 00:00 0
7f56f7c81000-7f56f7c83000 r-xp 00000000 fd:00 33555205 /usr/lib64/libfreebl3.so
7f56f7c83000-7f56f7e82000 ---p 00002000 fd:00 33555205 /usr/lib64/libfreebl3.so
7f56f7e82000-7f56f7e83000 r--p 00001000 fd:00 33555205 /usr/lib64/libfreebl3.so
7f56f7e83000-7f56f7e84000 rw-p 00002000 fd:00 33555205 /usr/lib64/libfreebl3.so
7f56f7e84000-7f56f7ee4000 r-xp 00000000 fd:00 33559732 /usr/lib64/libpcre.so.1.2.0
7f56f7ee4000-7f56f80e4000 ---p 00060000 fd:00 33559732 /usr/lib64/libpcre.so.1.2.0
7f56f80e4000-7f56f80e5000 r--p 00060000 fd:00 33559732 /usr/lib64/libpcre.so.1.2.0
7f56f80e5000-7f56f80e6000 rw-p 00061000 fd:00 33559732 /usr/lib64/libpcre.so.1.2.0
7f56f80e6000-7f56f80ee000 r-xp 00000000 fd:00 33592568 /usr/lib64/libcrypt-2.17.so
7f56f80ee000-7f56f82ed000 ---p 00008000 fd:00 33592568 /usr/lib64/libcrypt-2.17.so
7f56f82ed000-7f56f82ee000 r--p 00007000 fd:00 33592568 /usr/lib64/libcrypt-2.17.so
7f56f82ee000-7f56f82ef000 rw-p 00008000 fd:00 33592568 /usr/lib64/libcrypt-2.17.so
7f56f82ef000-7f56f831d000 rw-p 00000000 00:00 0
7f56f831d000-7f56f8341000 r-xp 00000000 fd:00 33566419 /usr/lib64/libselinux.so.1
7f56f8341000-7f56f8540000 ---p 00024000 fd:00 33566419 /usr/lib64/libselinux.so.1
7f56f8540000-7f56f8541000 r--p 00023000 fd:00 33566419 /usr/lib64/libselinux.so.1
7f56f8541000-7f56f8542000 rw-p 00024000 fd:00 33566419 /usr/lib64/libselinux.so.1
7f56f8542000-7f56f8544000 rw-p 00000000 00:00 0
7f56f8544000-7f56f8560000 r-xp 00000000 fd:00 33560862 /usr/lib64/libsasl2.so.3.0.0
7f56f8560000-7f56f875f000 ---p 0001c000 fd:00 33560862 /usr/lib64/libsasl2.so.3.0.0
7f56f875f000-7f56f8760000 r--p 0001b000 fd:00 33560862 /usr/lib64/libsasl2.so.3.0.0
7f56f8760000-7f56f8761000 rw-p 0001c000 fd:00 33560862 /usr/lib64/libsasl2.so.3.0.0
7f56f8761000-7f56f8777000 r-xp 00000000 fd:00 34249428 /usr/lib64/libresolv-2.17.so
7f56f8777000-7f56f8977000 ---p 00016000 fd:00 34249428 /usr/lib64/libresolv-2.17.so
7f56f8977000-7f56f8978000 r--p 00016000 fd:00 34249428 /usr/lib64/libresolv-2.17.so
7f56f8978000-7f56f8979000 rw-p 00017000 fd:00 34249428 /usr/lib64/libresolv-2.17.so
7f56f8979000-7f56f897b000 rw-p 00000000 00:00 0
7f56f897b000-7f56f897e000 r-xp 00000000 fd:00 33560338 /usr/lib64/libkeyutils.so.1.5
7f56f897e000-7f56f8b7d000 ---p 00003000 fd:00 33560338 /usr/lib64/libkeyutils.so.1.5
7f56f8b7d000-7f56f8b7e000 r--p 00002000 fd:00 33560338 /usr/lib64/libkeyutils.so.1.5
7f56f8b7e000-7f56f8b7f000 rw-p 00003000 fd:00 33560338 /usr/lib64/libkeyutils.so.1.5
7f56f8b7f000-7f56f8b8d000 r-xp 00000000 fd:00 33980566 /usr/lib64/libkrb5support.so.0.1
7f56f8b8d000-7f56f8d8d000 ---p 0000e000 fd:00 33980566 /usr/lib64/libkrb5support.so.0.1
7f56f8d8d000-7f56f8d8e000 r--p 0000e000 fd:00 33980566 /usr/lib64/libkrb5support.so.0.1
7f56f8d8e000-7f56f8d8f000 rw-p 0000f000 fd:00 33980566 /usr/lib64/libkrb5support.so.0.1
7f56f8d8f000-7f56f8df6000 r-xp 00000000 fd:00 33560858 /usr/lib64/libssl.so.1.0.2k
7f56f8df6000-7f56f8ff6000 ---p 00067000 fd:00 33560858 /usr/lib64/libssl.so.1.0.2k
7f56f8ff6000-7f56f8ffa000 r--p 00067000 fd:00 33560858 /usr/lib64/libssl.so.1.0.2k
7f56f8ffa000-7f56f9001000 rw-p 0006b000 fd:00 33560858 /usr/lib64/libssl.so.1.0.2k
7f56f9001000-7f56f900a000 r-xp 00000000 fd:00 33567390 /usr/lib64/libltdl.so.7.3.0
7f56f900a000-7f56f9209000 ---p 00009000 fd:00 33567390 /usr/lib64/libltdl.so.7.3.0
7f56f9209000-7f56f920a000 r--p 00008000 fd:00 33567390 /usr/lib64/libltdl.so.7.3.0
7f56f920a000-7f56f920b000 rw-p 00009000 fd:00 33567390 /usr/lib64/libltdl.so.7.3.0
7f56f920b000-7f56f9215000 r-xp 00000000 fd:00 33979870 /usr/lib64/libnuma.so.1.0.0
7f56f9215000-7f56f9415000 ---p 0000a000 fd:00 33979870 /usr/lib64/libnuma.so.1.0.0
7f56f9415000-7f56f9416000 r--p 0000a000 fd:00 33979870 /usr/lib64/libnuma.so.1.0.0
7f56f9416000-7f56f9417000 rw-p 0000b000 fd:00 33979870 /usr/lib64/libnuma.so.1.0.0
7f56f9417000-7f56f9469000 r-xp 00000000 fd:00 34285976 /usr/lib64/libldap-2.4.so.2.10.7
7f56f9469000-7f56f9669000 ---p 00052000 fd:00 34285976 /usr/lib64/libldap-2.4.so.2.10.7
7f56f9669000-7f56f966b000 r--p 00052000 fd:00 34285976 /usr/lib64/libldap-2.4.so.2.10.7
7f56f966b000-7f56f966c000 rw-p 00054000 fd:00 34285976 /usr/lib64/libldap-2.4.so.2.10.7
7f56f966c000-7f56f967a000 r-xp 00000000 fd:00 34285975 /usr/lib64/liblber-2.4.so.2.10.7
7f56f967a000-7f56f9879000 ---p 0000e000 fd:00 34285975 /usr/lib64/liblber-2.4.so.2.10.7
7f56f9879000-7f56f987a000 r--p 0000d000 fd:00 34285975 /usr/lib64/liblber-2.4.so.2.10.7
7f56f987a000-7f56f987b000 rw-p 0000e000 fd:00 34285975 /usr/lib64/liblber-2.4.so.2.10.7
7f56f987b000-7f56f987e000 r-xp 00000000 fd:00 33559777 /usr/lib64/libcom_err.so.2.1
7f56f987e000-7f56f9a7d000 ---p 00003000 fd:00 33559777 /usr/lib64/libcom_err.so.2.1
7f56f9a7d000-7f56f9a7e000 r--p 00002000 fd:00 33559777 /usr/lib64/libcom_err.so.2.1
7f56f9a7e000-7f56f9a7f000 rw-p 00003000 fd:00 33559777 /usr/lib64/libcom_err.so.2.1
7f56f9a7f000-7f56f9ab0000 r-xp 00000000 fd:00 34441109 /usr/lib64/libk5crypto.so.3.1
7f56f9ab0000-7f56f9caf000 ---p 00031000 fd:00 34441109 /usr/lib64/libk5crypto.so.3.1
7f56f9caf000-7f56f9cb1000 r--p 00030000 fd:00 34441109 /usr/lib64/libk5crypto.so.3.1
7f56f9cb1000-7f56f9cb2000 rw-p 00032000 fd:00 34441109 /usr/lib64/libk5crypto.so.3.1
7f56f9cb2000-7f56f9d8b000 r-xp 00000000 fd:00 34441111 /usr/lib64/libkrb5.so.3.3
7f56f9d8b000-7f56f9f8a000 ---p 000d9000 fd:00 34441111 /usr/lib64/libkrb5.so.3.3
7f56f9f8a000-7f56f9f98000 r--p 000d8000 fd:00 34441111 /usr/lib64/libkrb5.so.3.3
7f56f9f98000-7f56f9f9b000 rw-p 000e6000 fd:00 34441111 /usr/lib64/libkrb5.so.3.3
7f56f9f9b000-7f56f9fe5000 r-xp 00000000 fd:00 34441106 /usr/lib64/libgssapi_krb5.so.2.2
7f56f9fe5000-7f56fa1e5000 ---p 0004a000 fd:00 34441106 /usr/lib64/libgssapi_krb5.so.2.2
7f56fa1e5000-7f56fa1e6000 r--p 0004a000 fd:00 34441106 /usr/lib64/libgssapi_krb5.so.2.2
7f56fa1e6000-7f56fa1e8000 rw-p 0004b000 fd:00 34441106 /usr/lib64/libgssapi_krb5.so.2.2
7f56fa1e8000-7f56fa222000 r-xp 00000000 fd:00 33592603 /usr/lib64/libnspr4.so
7f56fa222000-7f56fa422000 ---p 0003a000 fd:00 33592603 /usr/lib64/libnspr4.so
7f56fa422000-7f56fa423000 r--p 0003a000 fd:00 33592603 /usr/lib64/libnspr4.so
7f56fa423000-7f56fa425000 rw-p 0003b000 fd:00 33592603 /usr/lib64/libnspr4.so
7f56fa425000-7f56fa427000 rw-p 00000000 00:00 0
7f56fa427000-7f56fa42b000 r-xp 00000000 fd:00 33592604 /usr/lib64/libplc4.so
7f56fa42b000-7f56fa62a000 ---p 00004000 fd:00 33592604 /usr/lib64/libplc4.so
7f56fa62a000-7f56fa62b000 r--p 00003000 fd:00 33592604 /usr/lib64/libplc4.so
7f56fa62b000-7f56fa62c000 rw-p 00004000 fd:00 33592604 /usr/lib64/libplc4.so
7f56fa62c000-7f56fa62f000 r-xp 00000000 fd:00 33592605 /usr/lib64/libplds4.so
7f56fa62f000-7f56fa82e000 ---p 00003000 fd:00 33592605 /usr/lib64/libplds4.so
7f56fa82e000-7f56fa82f000 r--p 00002000 fd:00 33592605 /usr/lib64/libplds4.so
7f56fa82f000-7f56fa830000 rw-p 00003000 fd:00 33592605 /usr/lib64/libplds4.so
7f56fa830000-7f56fa859000 r-xp 00000000 fd:00 33592606 /usr/lib64/libnssutil3.so
7f56fa859000-7f56faa59000 ---p 00029000 fd:00 33592606 /usr/lib64/libnssutil3.so
7f56faa59000-7f56faa60000 r--p 00029000 fd:00 33592606 /usr/lib64/libnssutil3.so
7f56faa60000-7f56faa61000 rw-p 00030000 fd:00 33592606 /usr/lib64/libnssutil3.so
7f56faa61000-7f56fab92000 r-xp 00000000 fd:00 34956963 /usr/lib64/libnss3.so
7f56fab92000-7f56fad92000 ---p 00131000 fd:00 34956963 /usr/lib64/libnss3.so
7f56fad92000-7f56fad97000 r--p 00131000 fd:00 34956963 /usr/lib64/libnss3.so
7f56fad97000-7f56fad9a000 rw-p 00136000 fd:00 34956963 /usr/lib64/libnss3.so
7f56fad9a000-7f56fad9b000 rw-p 00000000 00:00 0
7f56fad9b000-7f56fadc0000 r-xp 00000000 fd:00 34956964 /usr/lib64/libsmime3.so
7f56fadc0000-7f56fafbf000 ---p 00025000 fd:00 34956964 /usr/lib64/libsmime3.so
7f56fafbf000-7f56fafc2000 r--p 00024000 fd:00 34956964 /usr/lib64/libsmime3.so
7f56fafc2000-7f56fafc3000 rw-p 00027000 fd:00 34956964 /usr/lib64/libsmime3.so
7f56fafc3000-7f56fb023000 r-xp 00000000 fd:00 35451453 /usr/lib64/libssl3.so
7f56fb023000-7f56fb222000 ---p 00060000 fd:00 35451453 /usr/lib64/libssl3.so
7f56fb222000-7f56fb226000 r--p 0005f000 fd:00 35451453 /usr/lib64/libssl3.so
7f56fb226000-7f56fb227000 rw-p 00063000 fd:00 35451453 /usr/lib64/libssl3.so
7f56fb227000-7f56fb228000 rw-p 00000000 00:00 0
7f56fb228000-7f56fb253000 r-xp 00000000 fd:00 33897521 /usr/lib64/libssh2.so.1.0.1
7f56fb253000-7f56fb453000 ---p 0002b000 fd:00 33897521 /usr/lib64/libssh2.so.1.0.1
7f56fb453000-7f56fb454000 r--p 0002b000 fd:00 33897521 /usr/lib64/libssh2.so.1.0.1
7f56fb454000-7f56fb455000 rw-p 0002c000 fd:00 33897521 /usr/lib64/libssh2.so.1.0.1
7f56fb455000-7f56fb487000 r-xp 00000000 fd:00 33560129 /usr/lib64/libidn.so.11.6.11
7f56fb487000-7f56fb686000 ---p 00032000 fd:00 33560129 /usr/lib64/libidn.so.11.6.11
7f56fb686000-7f56fb687000 r--p 00031000 fd:00 33560129 /usr/lib64/libidn.so.11.6.11
7f56fb687000-7f56fb688000 rw-p 00032000 fd:00 33560129 /usr/lib64/libidn.so.11.6.11
7f56fb688000-7f56fb6c4000 r-xp 00000000 fd:00 33571319 /usr/lib64/libhwloc.so.5.7.5
7f56fb6c4000-7f56fb8c3000 ---p 0003c000 fd:00 33571319 /usr/lib64/libhwloc.so.5.7.5
7f56fb8c3000-7f56fb8c4000 r--p 0003b000 fd:00 33571319 /usr/lib64/libhwloc.so.5.7.5
7f56fb8c4000-7f56fb8c5000 rw-p 0003c000 fd:00 33571319 /usr/lib64/libhwloc.so.5.7.5
7f56fb8c5000-7f56fb8c7000 r-xp 00000000 fd:00 34249436 /usr/lib64/libutil-2.17.so
7f56fb8c7000-7f56fbac6000 ---p 00002000 fd:00 34249436 /usr/lib64/libutil-2.17.so
7f56fbac6000-7f56fbac7000 r--p 00001000 fd:00 34249436 /usr/lib64/libutil-2.17.so
7f56fbac7000-7f56fbac8000 rw-p 00002000 fd:00 34249436 /usr/lib64/libutil-2.17.so
7f56fbac8000-7f56fbacf000 r-xp 00000000 fd:00 34249432 /usr/lib64/librt-2.17.so
7f56fbacf000-7f56fbcce000 ---p 00007000 fd:00 34249432 /usr/lib64/librt-2.17.so
7f56fbcce000-7f56fbccf000 r--p 00006000 fd:00 34249432 /usr/lib64/librt-2.17.so
7f56fbccf000-7f56fbcd0000 rw-p 00007000 fd:00 34249432 /usr/lib64/librt-2.17.so
7f56fbcd0000-7f56fbcd2000 r-xp 00000000 fd:00 33592573 /usr/lib64/libdl-2.17.so
7f56fbcd2000-7f56fbed2000 ---p 00002000 fd:00 33592573 /usr/lib64/libdl-2.17.so
7f56fbed2000-7f56fbed3000 r--p 00002000 fd:00 33592573 /usr/lib64/libdl-2.17.so
7f56fbed3000-7f56fbed4000 rw-p 00003000 fd:00 33592573 /usr/lib64/libdl-2.17.so
7f56fbed4000-7f56fbf6b000 r-xp 00000000 fd:00 101867920 /usr/lib64/openmpi/lib/libopen-pal.so.13.0.4
7f56fbf6b000-7f56fc16a000 ---p 00097000 fd:00 101867920 /usr/lib64/openmpi/lib/libopen-pal.so.13.0.4
7f56fc16a000-7f56fc16e000 r--p 00096000 fd:00 101867920 /usr/lib64/openmpi/lib/libopen-pal.so.13.0.4
7f56fc16e000-7f56fc172000 rw-p 0009a000 fd:00 101867920 /usr/lib64/openmpi/lib/libopen-pal.so.13.0.4
7f56fc172000-7f56fc178000 rw-p 00000000 00:00 0
7f56fc178000-7f56fc1ef000 r-xp 00000000 fd:00 101867922 /usr/lib64/openmpi/lib/libopen-rte.so.12.0.4
7f56fc1ef000-7f56fc3ee000 ---p 00077000 fd:00 101867922 /usr/lib64/openmpi/lib/libopen-rte.so.12.0.4
7f56fc3ee000-7f56fc3ef000 r--p 00076000 fd:00 101867922 /usr/lib64/openmpi/lib/libopen-rte.so.12.0.4
7f56fc3ef000-7f56fc3f3000 rw-p 00077000 fd:00 101867922 /usr/lib64/openmpi/lib/libopen-rte.so.12.0.4
7f56fc3f3000-7f56fc3f4000 rw-p 00000000 00:00 0
7f56fc3f4000-7f56fc5b8000 r-xp 00000000 fd:00 33592564 /usr/lib64/libc-2.17.so
7f56fc5b8000-7f56fc7b7000 ---p 001c4000 fd:00 33592564 /usr/lib64/libc-2.17.so
7f56fc7b7000-7f56fc7bb000 r--p 001c3000 fd:00 33592564 /usr/lib64/libc-2.17.so
7f56fc7bb000-7f56fc7bd000 rw-p 001c7000 fd:00 33592564 /usr/lib64/libc-2.17.so
7f56fc7bd000-7f56fc7c2000 rw-p 00000000 00:00 0
7f56fc7c2000-7f56fc7d7000 r-xp 00000000 fd:00 33993114 /usr/lib64/libgcc_s-4.8.5-20150702.so.1
7f56fc7d7000-7f56fc9d6000 ---p 00015000 fd:00 33993114 /usr/lib64/libgcc_s-4.8.5-20150702.so.1
7f56fc9d6000-7f56fc9d7000 r--p 00014000 fd:00 33993114 /usr/lib64/libgcc_s-4.8.5-20150702.so.1
7f56fc9d7000-7f56fc9d8000 rw-p 00015000 fd:00 33993114 /usr/lib64/libgcc_s-4.8.5-20150702.so.1
7f56fc9d8000-7f56fcad9000 r-xp 00000000 fd:00 33592577 /usr/lib64/libm-2.17.so
7f56fcad9000-7f56fccd8000 ---p 00101000 fd:00 33592577 /usr/lib64/libm-2.17.so
7f56fccd8000-7f56fccd9000 r--p 00100000 fd:00 33592577 /usr/lib64/libm-2.17.so
7f56fccd9000-7f56fccda000 rw-p 00101000 fd:00 33592577 /usr/lib64/libm-2.17.so
7f56fccda000-7f56fcdc3000 r-xp 00000000 fd:00 33592631 /usr/lib64/libstdc++.so.6.0.19
7f56fcdc3000-7f56fcfc3000 ---p 000e9000 fd:00 33592631 /usr/lib64/libstdc++.so.6.0.19
7f56fcfc3000-7f56fcfcb000 r--p 000e9000 fd:00 33592631 /usr/lib64/libstdc++.so.6.0.19
7f56fcfcb000-7f56fcfcd000 rw-p 000f1000 fd:00 33592631 /usr/lib64/libstdc++.so.6.0.19
7f56fcfcd000-7f56fcfe2000 rw-p 00000000 00:00 0
7f56fcfe2000-7f56fd219000 r-xp 00000000 fd:00 33560855 /usr/lib64/libcrypto.so.1.0.2k
7f56fd219000-7f56fd418000 ---p 00237000 fd:00 33560855 /usr/lib64/libcrypto.so.1.0.2k
7f56fd418000-7f56fd434000 r--p 00236000 fd:00 33560855 /usr/lib64/libcrypto.so.1.0.2k
7f56fd434000-7f56fd441000 rw-p 00252000 fd:00 33560855 /usr/lib64/libcrypto.so.1.0.2k
7f56fd441000-7f56fd445000 rw-p 00000000 00:00 0
7f56fd445000-7f56fd4ab000 r-xp 00000000 fd:00 33561907 /usr/lib64/libcurl.so.4.3.0
7f56fd4ab000-7f56fd6ab000 ---p 00066000 fd:00 33561907 /usr/lib64/libcurl.so.4.3.0
7f56fd6ab000-7f56fd6ad000 r--p 00066000 fd:00 33561907 /usr/lib64/libcurl.so.4.3.0
7f56fd6ad000-7f56fd6ae000 rw-p 00068000 fd:00 33561907 /usr/lib64/libcurl.so.4.3.0
7f56fd6ae000-7f56fd6af000 rw-p 00000000 00:00 0
7f56fd6af000-7f56fd6c6000 r-xp 00000000 fd:00 34249426 /usr/lib64/libpthread-2.17.so
7f56fd6c6000-7f56fd8c5000 ---p 00017000 fd:00 34249426 /usr/lib64/libpthread-2.17.so
7f56fd8c5000-7f56fd8c6000 r--p 00016000 fd:00 34249426 /usr/lib64/libpthread-2.17.so
7f56fd8c6000-7f56fd8c7000 rw-p 00017000 fd:00 34249426 /usr/lib64/libpthread-2.17.so
7f56fd8c7000-7f56fd8cb000 rw-p 00000000 00:00 0
7f56fd8cb000-7f56fd8f0000 r-xp 00000000 fd:00 33559778 /usr/lib64/liblzma.so.5.2.2
7f56fd8f0000-7f56fdaef000 ---p 00025000 fd:00 33559778 /usr/lib64/liblzma.so.5.2.2
7f56fdaef000-7f56fdaf0000 r--p 00024000 fd:00 33559778 /usr/lib64/liblzma.so.5.2.2
7f56fdaf0000-7f56fdaf1000 rw-p 00025000 fd:00 33559778 /usr/lib64/liblzma.so.5.2.2
7f56fdaf1000-7f56fdb00000 r-xp 00000000 fd:00 33559915 /usr/lib64/libbz2.so.1.0.6
7f56fdb00000-7f56fdcff000 ---p 0000f000 fd:00 33559915 /usr/lib64/libbz2.so.1.0.6
7f56fdcff000-7f56fdd00000 r--p 0000e000 fd:00 33559915 /usr/lib64/libbz2.so.1.0.6
7f56fdd00000-7f56fdd01000 rw-p 0000f000 fd:00 33559915 /usr/lib64/libbz2.so.1.0.6
7f56fdd01000-7f56fdd16000 r-xp 00000000 fd:00 33566421 /usr/lib64/libz.so.1.2.7
7f56fdd16000-7f56fdf15000 ---p 00015000 fd:00 33566421 /usr/lib64/libz.so.1.2.7
7f56fdf15000-7f56fdf16000 r--p 00014000 fd:00 33566421 /usr/lib64/libz.so.1.2.7
7f56fdf16000-7f56fdf17000 rw-p 00015000 fd:00 33566421 /usr/lib64/libz.so.1.2.7
7f56fdf17000-7f56fdfd7000 r-xp 00000000 fd:00 101867909 /usr/lib64/openmpi/lib/libmpi.so.12.0.7
7f56fdfd7000-7f56fe1d6000 ---p 000c0000 fd:00 101867909 /usr/lib64/openmpi/lib/libmpi.so.12.0.7
7f56fe1d6000-7f56fe1d8000 r--p 000bf000 fd:00 101867909 /usr/lib64/openmpi/lib/libmpi.so.12.0.7
7f56fe1d8000-7f56fe1e8000 rw-p 000c1000 fd:00 101867909 /usr/lib64/openmpi/lib/libmpi.so.12.0.7
7f56fe1e8000-7f56fe1fb000 rw-p 00000000 00:00 0
7f56fe1fb000-7f56fe21d000 r-xp 00000000 fd:00 33592556 /usr/lib64/ld-2.17.so
7f56fe2de000-7f56fe41c000 rw-p 00000000 00:00 0
7f56fe41c000-7f56fe41d000 r--p 00021000 fd:00 33592556 /usr/lib64/ld-2.17.so
7f56fe41d000-7f56fe41e000 rw-p 00022000 fd:00 33592556 /usr/lib64/ld-2.17.so
7f56fe41e000-7f56fe41f000 rw-p 00000000 00:00 0
7ffdd719d000-7ffdd71bf000 rw-p 00000000 00:00 0 [stack]
7ffdd71cf000-7ffdd71d1000 r-xp 00000000 00:00 0 [vdso]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0 [vsyscall]
/var/spool/torque/mom_priv/jobs/552215.headnode03.cent.gla.ac.uk.SC: line 33: 506 Aborted (core dumped) angsd -doMaf 4 -beagle Ind_genotype_likelihoods.beagle.gz -yBin torporbin -doAsso 2 -fai $REF_PATH/ref.fasta.fai

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant