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  1. Reads2Resistome Reads2Resistome Public

    Hybrid and non-hybrid whole genome assembler with resistome identification for Illumina, PacBio and Nanopore reads.

    Nextflow 5 3

  2. AMR-and-Virulence-factor-visualization-in-R AMR-and-Virulence-factor-visualization-in-R Public

    R script to generate heatmaps from AMR and Virulence Factor presence/absence data

    R 3 2

  3. Random-R-Scripts-heatmaps-and-clustering Random-R-Scripts-heatmaps-and-clustering Public

    Script to make pheatmaps with metadata in R using presence/absence (or continuous) contingency tables

    R 1

  4. WrightonLabCSU/CAMPER WrightonLabCSU/CAMPER Public

    This is a repository for CAMPER.

    Python 11

  5. WrightonLabCSU/JGI-API-Request WrightonLabCSU/JGI-API-Request Public

    Python script is designed to fetch and process genomic data from the Joint Genome Institute (JGI) API, allowing users to request file downloads programmatically based on given taxon IDs.

    Python 2 1

  6. Nextflow-Adventures Nextflow-Adventures Public

    Repository full of Nextflow Examples and Tutorials

    Nextflow 3