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updated #15 and 16 in Reconstruction Pipeline
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Megna Shah
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May 20, 2014
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122 changes: 88 additions & 34 deletions
122
Support/PrebuiltPipelines/Workshop/Reconstruction/(15) 12 Percent Full Reconstruction.txt
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@@ -1,88 +1,142 @@ | ||
[PipelineBuilder] | ||
Number_Filters=13 | ||
Name=(15) 12 Percent Full Reconstruction | ||
Number_Filters=13 | ||
Version=5.0.6545 | ||
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||
[0] | ||
Filter_Name=ReadH5Ebsd | ||
Filter_Human_Label=Read H5Ebsd File | ||
DataContainerName=VolumeDataContainer | ||
CellAttributeMatrixName=CellData | ||
CellEnsembleAttributeMatrixName=CellEnsembleData | ||
InputFile=Data/12PercentTension/12PercentTension.h5ebsd | ||
RefFrameZDir=2 | ||
ZStartIndex=101 | ||
ZEndIndex=300 | ||
UseTransformations=true | ||
ArraySelections_VoxelCell\size=4 | ||
ArraySelections_VoxelCell\1\VoxelCell=Confidence Index | ||
ArraySelections_VoxelCell\2\VoxelCell=EulerAngles | ||
ArraySelections_VoxelCell\3\VoxelCell=Image Quality | ||
ArraySelections_VoxelCell\4\VoxelCell=Phases | ||
ArraySelections_VoxelField\size=0 | ||
ArraySelections_VoxelEnsemble\size=2 | ||
ArraySelections_VoxelEnsemble\1\VoxelEnsemble=CrystalStructures | ||
ArraySelections_VoxelEnsemble\2\VoxelEnsemble=MaterialName | ||
ArraySelections_SurfaceMeshPoint\size=0 | ||
ArraySelections_SurfaceMeshFace\size=0 | ||
ArraySelections_SurfaceMeshEdge\size=0 | ||
ArraySelections_SolidMeshPoint\size=0 | ||
ArraySelections_SolidMeshFace\size=0 | ||
ArraySelections_SolidMeshEnsemble\size=0 | ||
UseTransformations=1 | ||
ArraySelections_SelectedArrayNames\size=6 | ||
ArraySelections_SelectedArrayNames\1\SelectedArrayNames=EulerAngles | ||
ArraySelections_SelectedArrayNames\2\SelectedArrayNames=Phases | ||
ArraySelections_SelectedArrayNames\3\SelectedArrayNames=SEM Signal | ||
ArraySelections_SelectedArrayNames\4\SelectedArrayNames=Confidence Index | ||
ArraySelections_SelectedArrayNames\5\SelectedArrayNames=Fit | ||
ArraySelections_SelectedArrayNames\6\SelectedArrayNames=Image Quality | ||
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[1] | ||
Filter_Name=MultiThresholdCells | ||
OutputArrayName=GoodVoxels | ||
ComparisonInputs\size=2 | ||
ComparisonInputs\1\ArrayName=Image Quality | ||
ComparisonInputs\1\CompOperator=1 | ||
ComparisonInputs\1\CompValue=900 | ||
ComparisonInputs\2\ArrayName=Confidence Index | ||
ComparisonInputs\2\CompOperator=1 | ||
ComparisonInputs\2\CompValue=0.100000001490116 | ||
Filter_Name=MultiThresholdObjects | ||
Filter_Human_Label=Threshold Objects | ||
DestinationArrayName=GoodVoxels | ||
SelectedThresholds\size=2 | ||
SelectedThresholds\1\DataContainerName=VolumeDataContainer | ||
SelectedThresholds\1\AttributeMatrixName=CellData | ||
SelectedThresholds\1\AttributeArrayName=Image Quality | ||
SelectedThresholds\1\CompOperator=1 | ||
SelectedThresholds\1\CompValue=900 | ||
SelectedThresholds\2\DataContainerName=VolumeDataContainer | ||
SelectedThresholds\2\AttributeMatrixName=CellData | ||
SelectedThresholds\2\AttributeArrayName=Confidence Index | ||
SelectedThresholds\2\CompOperator=1 | ||
SelectedThresholds\2\CompValue=0.100000001490116 | ||
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||
[2] | ||
Filter_Name=FindCellQuats | ||
Filter_Human_Label=Find Cell Quaternions | ||
QuatsArrayName=Quats | ||
CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
CellEulerAnglesArrayPath=VolumeDataContainer|CellData|EulerAngles | ||
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||
[3] | ||
Filter_Name=AlignSectionsMisorientation | ||
Filter_Human_Label=Align Sections (Misorientation) | ||
AlignmentShiftFileName= | ||
WriteAlignmentShifts=0 | ||
CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
UseGoodVoxels=1 | ||
CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
QuatsArrayPath=VolumeDataContainer|CellData|Quats | ||
MisorientationTolerance=5 | ||
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||
[4] | ||
Filter_Name=IdentifySample | ||
Filter_Human_Label=Identify Sample | ||
GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
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||
[5] | ||
Filter_Name=AlignSectionsFeatureCentroid | ||
UseReferenceSlice=true | ||
Filter_Human_Label=Align Sections (Feature Centroid) | ||
AlignmentShiftFileName= | ||
WriteAlignmentShifts=0 | ||
GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
UseReferenceSlice=1 | ||
ReferenceSlice=0 | ||
|
||
[6] | ||
Filter_Name=BadDataNeighborOrientationCheck | ||
Filter_Human_Label=Neighbor Orientation Comparison (Bad Data) | ||
QuatsArrayPath=VolumeDataContainer|CellData|Quats | ||
CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
MisorientationTolerance=5 | ||
NumberOfNeighbors=4 | ||
NumberofNeighbors=4 | ||
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||
[7] | ||
Filter_Name=NeighborOrientationCorrelation | ||
MinConfidence=0.2 | ||
Filter_Human_Label=Neighbor Orientation Correlation | ||
QuatsArrayPath=VolumeDataContainer|CellData|Quats | ||
CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
ConfidenceIndexArrayPath=VolumeDataContainer|CellData|Confidence Index | ||
MisorientationTolerance=5 | ||
MinConfidence=0.2 | ||
Level=4 | ||
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||
[8] | ||
Filter_Name=EBSDSegmentGrains | ||
Filter_Name=EBSDSegmentFeatures | ||
Filter_Human_Label=Segment Features (Misorientation) | ||
CellFeatureAttributeMatrixName=CellFeatureData | ||
ActiveArrayName=Active | ||
FeatureIdsArrayName=FeatureIds | ||
QuatsArrayPath=VolumeDataContainer|CellData|Quats | ||
CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
UseGoodVoxels=1 | ||
MisorientationTolerance=5 | ||
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||
[9] | ||
Filter_Name=MinSize | ||
MinAllowedGrainSize=16 | ||
Filter_Human_Label=Minimum Size Filter | ||
FeaturePhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
FeatureIdsArrayPath=VolumeDataContainer|CellData|FeatureIds | ||
MinAllowedFeatureSize=16 | ||
ApplyToSinglePhase=0 | ||
PhaseNumber=0 | ||
|
||
[10] | ||
Filter_Name=FillBadData | ||
Filter_Human_Label=Fill Bad Data | ||
FeatureIdsArrayPath=VolumeDataContainer|CellData|FeatureIds | ||
MinAllowedDefectSize=1000 | ||
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||
[11] | ||
Filter_Name=GenerateIPFColors | ||
Filter_Human_Label=Generate IPF Colors | ||
UseGoodVoxels=0 | ||
GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
CellEulerAnglesArrayPath=VolumeDataContainer|CellData|EulerAngles | ||
CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
CellIPFColorsArrayName=IPFColor | ||
ReferenceDir\size=3 | ||
ReferenceDir\1\x=0 | ||
ReferenceDir\2\y=0 | ||
ReferenceDir\3\z=1 | ||
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[12] | ||
Filter_Name=DataContainerWriter | ||
Filter_Human_Label=Write DREAM3D Data File | ||
OutputFile=Data/Output/12PercentTension.dream3d | ||
WriteVoxelData=true | ||
WriteSurfaceMeshData=false | ||
WriteXdmfFile=true | ||
WriteXdmfFile=1 |
104 changes: 67 additions & 37 deletions
104
Support/PrebuiltPipelines/Workshop/Reconstruction/(16) MicroTextureReconstruction.txt
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Original file line number | Diff line number | Diff line change |
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@@ -1,70 +1,100 @@ | ||
[PipelineBuilder] | ||
Number_Filters=9 | ||
Name=(16) MicroTextureReconstruction | ||
Number_Filters=9 | ||
Version=5.0.6545 | ||
|
||
[0] | ||
Filter_Name=ReadH5Ebsd | ||
Filter_Human_Label=Read H5Ebsd File | ||
DataContainerName=VolumeDataContainer | ||
CellAttributeMatrixName=CellData | ||
CellEnsembleAttributeMatrixName=CellEnsembleData | ||
InputFile=Data/Microtexture/MicrotexturedTi.h5ebsd | ||
RefFrameZDir=2 | ||
ZStartIndex=0 | ||
ZEndIndex=0 | ||
UseTransformations=true | ||
ArraySelections_VoxelCell\size=6 | ||
ArraySelections_VoxelCell\1\VoxelCell=Confidence Index | ||
ArraySelections_VoxelCell\2\VoxelCell=EulerAngles | ||
ArraySelections_VoxelCell\3\VoxelCell=Fit | ||
ArraySelections_VoxelCell\4\VoxelCell=Image Quality | ||
ArraySelections_VoxelCell\5\VoxelCell=Phases | ||
ArraySelections_VoxelCell\6\VoxelCell=SEM Signal | ||
ArraySelections_VoxelField\size=0 | ||
ArraySelections_VoxelEnsemble\size=3 | ||
ArraySelections_VoxelEnsemble\1\VoxelEnsemble=CrystalStructures | ||
ArraySelections_VoxelEnsemble\2\VoxelEnsemble=LatticeConstants | ||
ArraySelections_VoxelEnsemble\3\VoxelEnsemble=MaterialName | ||
ArraySelections_SurfaceMeshPoint\size=0 | ||
ArraySelections_SurfaceMeshFace\size=0 | ||
ArraySelections_SurfaceMeshEdge\size=0 | ||
ArraySelections_SolidMeshPoint\size=0 | ||
ArraySelections_SolidMeshFace\size=0 | ||
ArraySelections_SolidMeshEnsemble\size=0 | ||
UseTransformations=1 | ||
ArraySelections_SelectedArrayNames\size=6 | ||
ArraySelections_SelectedArrayNames\1\SelectedArrayNames=EulerAngles | ||
ArraySelections_SelectedArrayNames\2\SelectedArrayNames=Phases | ||
ArraySelections_SelectedArrayNames\3\SelectedArrayNames=SEM Signal | ||
ArraySelections_SelectedArrayNames\4\SelectedArrayNames=Confidence Index | ||
ArraySelections_SelectedArrayNames\5\SelectedArrayNames=Fit | ||
ArraySelections_SelectedArrayNames\6\SelectedArrayNames=Image Quality | ||
|
||
[1] | ||
Filter_Name=SingleThresholdCells | ||
SelectedCellArrayName=Confidence Index | ||
ComparisonOperator=1 | ||
ComparisonValue=0 | ||
OutputArrayName=GoodVoxels | ||
Filter_Name=MultiThresholdObjects | ||
Filter_Human_Label=Threshold Objects | ||
DestinationArrayName=GoodVoxels | ||
SelectedThresholds\size=1 | ||
SelectedThresholds\1\DataContainerName=VolumeDataContainer | ||
SelectedThresholds\1\AttributeMatrixName=CellData | ||
SelectedThresholds\1\AttributeArrayName=Confidence Index | ||
SelectedThresholds\1\CompOperator=1 | ||
SelectedThresholds\1\CompValue=0 | ||
|
||
[2] | ||
Filter_Name=FindCellQuats | ||
Filter_Human_Label=Find Cell Quaternions | ||
QuatsArrayName=Quats | ||
CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
CellEulerAnglesArrayPath=VolumeDataContainer|CellData|EulerAngles | ||
|
||
[3] | ||
Filter_Name=EBSDSegmentGrains | ||
Filter_Name=EBSDSegmentFeatures | ||
Filter_Human_Label=Segment Features (Misorientation) | ||
CellFeatureAttributeMatrixName=CellFeatureData | ||
ActiveArrayName=Active | ||
FeatureIdsArrayName=FeatureIds | ||
QuatsArrayPath=VolumeDataContainer|CellData|Quats | ||
CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
UseGoodVoxels=1 | ||
MisorientationTolerance=5 | ||
|
||
[4] | ||
Filter_Name=RenameCellArray | ||
SelectedCellArrayName=GrainIds | ||
NewCellArrayName=GraindIds(Miso) | ||
Filter_Name=RenameAttributeArray | ||
Filter_Human_Label=Rename Attribute Array | ||
SelectedArrayPath=VolumeDataContainer|CellData|FeatureIds | ||
NewArrayName=GrainIds(Miso) | ||
|
||
[5] | ||
Filter_Name=CAxisSegmentGrains | ||
MisorientationTolerance=15 | ||
Filter_Name=CAxisSegmentFeatures | ||
Filter_Human_Label=Segment Features (C-Axis Misorientation) | ||
CellFeatureAttributeMatrixName=CellFeatureData_caxis | ||
ActiveArrayName=Active | ||
FeatureIdsArrayName=FeatureIds | ||
QuatsArrayPath=VolumeDataContainer|CellData|Quats | ||
CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
UseGoodVoxels=1 | ||
MisorientationTolerance=5 | ||
|
||
[6] | ||
Filter_Name=RenameCellArray | ||
SelectedCellArrayName=GrainIds | ||
NewCellArrayName=GrainIds(C-Axis) | ||
Filter_Name=RenameAttributeArray | ||
Filter_Human_Label=Rename Attribute Array | ||
SelectedArrayPath=VolumeDataContainer|CellData|FeatureIds | ||
NewArrayName=GrainIDs(C-Axis) | ||
|
||
[7] | ||
Filter_Name=GenerateIPFColors | ||
Filter_Human_Label=Generate IPF Colors | ||
UseGoodVoxels=0 | ||
GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
CellEulerAnglesArrayPath=VolumeDataContainer|CellData|EulerAngles | ||
CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
CellIPFColorsArrayName=IPFColor | ||
ReferenceDir\size=3 | ||
ReferenceDir\1\x=0 | ||
ReferenceDir\2\y=0 | ||
ReferenceDir\3\z=1 | ||
|
||
[8] | ||
Filter_Name=DataContainerWriter | ||
Filter_Human_Label=Write DREAM3D Data File | ||
OutputFile=Data/Output/MicrotexturedTi.dream3d | ||
WriteVoxelData=true | ||
WriteSurfaceMeshData=false | ||
WriteXdmfFile=true | ||
WriteXdmfFile=1 |