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updated #15 and 16 in Reconstruction Pipeline
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Megna Shah
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May 20, 2014
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122 changes: 88 additions & 34 deletions
122
Support/PrebuiltPipelines/Workshop/Reconstruction/(15) 12 Percent Full Reconstruction.txt
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,88 +1,142 @@ | ||
| [PipelineBuilder] | ||
| Number_Filters=13 | ||
| Name=(15) 12 Percent Full Reconstruction | ||
| Number_Filters=13 | ||
| Version=5.0.6545 | ||
|
|
||
| [0] | ||
| Filter_Name=ReadH5Ebsd | ||
| Filter_Human_Label=Read H5Ebsd File | ||
| DataContainerName=VolumeDataContainer | ||
| CellAttributeMatrixName=CellData | ||
| CellEnsembleAttributeMatrixName=CellEnsembleData | ||
| InputFile=Data/12PercentTension/12PercentTension.h5ebsd | ||
| RefFrameZDir=2 | ||
| ZStartIndex=101 | ||
| ZEndIndex=300 | ||
| UseTransformations=true | ||
| ArraySelections_VoxelCell\size=4 | ||
| ArraySelections_VoxelCell\1\VoxelCell=Confidence Index | ||
| ArraySelections_VoxelCell\2\VoxelCell=EulerAngles | ||
| ArraySelections_VoxelCell\3\VoxelCell=Image Quality | ||
| ArraySelections_VoxelCell\4\VoxelCell=Phases | ||
| ArraySelections_VoxelField\size=0 | ||
| ArraySelections_VoxelEnsemble\size=2 | ||
| ArraySelections_VoxelEnsemble\1\VoxelEnsemble=CrystalStructures | ||
| ArraySelections_VoxelEnsemble\2\VoxelEnsemble=MaterialName | ||
| ArraySelections_SurfaceMeshPoint\size=0 | ||
| ArraySelections_SurfaceMeshFace\size=0 | ||
| ArraySelections_SurfaceMeshEdge\size=0 | ||
| ArraySelections_SolidMeshPoint\size=0 | ||
| ArraySelections_SolidMeshFace\size=0 | ||
| ArraySelections_SolidMeshEnsemble\size=0 | ||
| UseTransformations=1 | ||
| ArraySelections_SelectedArrayNames\size=6 | ||
| ArraySelections_SelectedArrayNames\1\SelectedArrayNames=EulerAngles | ||
| ArraySelections_SelectedArrayNames\2\SelectedArrayNames=Phases | ||
| ArraySelections_SelectedArrayNames\3\SelectedArrayNames=SEM Signal | ||
| ArraySelections_SelectedArrayNames\4\SelectedArrayNames=Confidence Index | ||
| ArraySelections_SelectedArrayNames\5\SelectedArrayNames=Fit | ||
| ArraySelections_SelectedArrayNames\6\SelectedArrayNames=Image Quality | ||
|
|
||
| [1] | ||
| Filter_Name=MultiThresholdCells | ||
| OutputArrayName=GoodVoxels | ||
| ComparisonInputs\size=2 | ||
| ComparisonInputs\1\ArrayName=Image Quality | ||
| ComparisonInputs\1\CompOperator=1 | ||
| ComparisonInputs\1\CompValue=900 | ||
| ComparisonInputs\2\ArrayName=Confidence Index | ||
| ComparisonInputs\2\CompOperator=1 | ||
| ComparisonInputs\2\CompValue=0.100000001490116 | ||
| Filter_Name=MultiThresholdObjects | ||
| Filter_Human_Label=Threshold Objects | ||
| DestinationArrayName=GoodVoxels | ||
| SelectedThresholds\size=2 | ||
| SelectedThresholds\1\DataContainerName=VolumeDataContainer | ||
| SelectedThresholds\1\AttributeMatrixName=CellData | ||
| SelectedThresholds\1\AttributeArrayName=Image Quality | ||
| SelectedThresholds\1\CompOperator=1 | ||
| SelectedThresholds\1\CompValue=900 | ||
| SelectedThresholds\2\DataContainerName=VolumeDataContainer | ||
| SelectedThresholds\2\AttributeMatrixName=CellData | ||
| SelectedThresholds\2\AttributeArrayName=Confidence Index | ||
| SelectedThresholds\2\CompOperator=1 | ||
| SelectedThresholds\2\CompValue=0.100000001490116 | ||
|
|
||
| [2] | ||
| Filter_Name=FindCellQuats | ||
| Filter_Human_Label=Find Cell Quaternions | ||
| QuatsArrayName=Quats | ||
| CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
| CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
| CellEulerAnglesArrayPath=VolumeDataContainer|CellData|EulerAngles | ||
|
|
||
| [3] | ||
| Filter_Name=AlignSectionsMisorientation | ||
| Filter_Human_Label=Align Sections (Misorientation) | ||
| AlignmentShiftFileName= | ||
| WriteAlignmentShifts=0 | ||
| CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
| GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
| UseGoodVoxels=1 | ||
| CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
| QuatsArrayPath=VolumeDataContainer|CellData|Quats | ||
| MisorientationTolerance=5 | ||
|
|
||
| [4] | ||
| Filter_Name=IdentifySample | ||
| Filter_Human_Label=Identify Sample | ||
| GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
|
|
||
| [5] | ||
| Filter_Name=AlignSectionsFeatureCentroid | ||
| UseReferenceSlice=true | ||
| Filter_Human_Label=Align Sections (Feature Centroid) | ||
| AlignmentShiftFileName= | ||
| WriteAlignmentShifts=0 | ||
| GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
| UseReferenceSlice=1 | ||
| ReferenceSlice=0 | ||
|
|
||
| [6] | ||
| Filter_Name=BadDataNeighborOrientationCheck | ||
| Filter_Human_Label=Neighbor Orientation Comparison (Bad Data) | ||
| QuatsArrayPath=VolumeDataContainer|CellData|Quats | ||
| CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
| CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
| GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
| MisorientationTolerance=5 | ||
| NumberOfNeighbors=4 | ||
| NumberofNeighbors=4 | ||
|
|
||
| [7] | ||
| Filter_Name=NeighborOrientationCorrelation | ||
| MinConfidence=0.2 | ||
| Filter_Human_Label=Neighbor Orientation Correlation | ||
| QuatsArrayPath=VolumeDataContainer|CellData|Quats | ||
| CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
| CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
| ConfidenceIndexArrayPath=VolumeDataContainer|CellData|Confidence Index | ||
| MisorientationTolerance=5 | ||
| MinConfidence=0.2 | ||
| Level=4 | ||
|
|
||
| [8] | ||
| Filter_Name=EBSDSegmentGrains | ||
| Filter_Name=EBSDSegmentFeatures | ||
| Filter_Human_Label=Segment Features (Misorientation) | ||
| CellFeatureAttributeMatrixName=CellFeatureData | ||
| ActiveArrayName=Active | ||
| FeatureIdsArrayName=FeatureIds | ||
| QuatsArrayPath=VolumeDataContainer|CellData|Quats | ||
| CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
| CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
| GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
| UseGoodVoxels=1 | ||
| MisorientationTolerance=5 | ||
|
|
||
| [9] | ||
| Filter_Name=MinSize | ||
| MinAllowedGrainSize=16 | ||
| Filter_Human_Label=Minimum Size Filter | ||
| FeaturePhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
| FeatureIdsArrayPath=VolumeDataContainer|CellData|FeatureIds | ||
| MinAllowedFeatureSize=16 | ||
| ApplyToSinglePhase=0 | ||
| PhaseNumber=0 | ||
|
|
||
| [10] | ||
| Filter_Name=FillBadData | ||
| Filter_Human_Label=Fill Bad Data | ||
| FeatureIdsArrayPath=VolumeDataContainer|CellData|FeatureIds | ||
| MinAllowedDefectSize=1000 | ||
|
|
||
| [11] | ||
| Filter_Name=GenerateIPFColors | ||
| Filter_Human_Label=Generate IPF Colors | ||
| UseGoodVoxels=0 | ||
| GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
| CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
| CellEulerAnglesArrayPath=VolumeDataContainer|CellData|EulerAngles | ||
| CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
| CellIPFColorsArrayName=IPFColor | ||
| ReferenceDir\size=3 | ||
| ReferenceDir\1\x=0 | ||
| ReferenceDir\2\y=0 | ||
| ReferenceDir\3\z=1 | ||
|
|
||
| [12] | ||
| Filter_Name=DataContainerWriter | ||
| Filter_Human_Label=Write DREAM3D Data File | ||
| OutputFile=Data/Output/12PercentTension.dream3d | ||
| WriteVoxelData=true | ||
| WriteSurfaceMeshData=false | ||
| WriteXdmfFile=true | ||
| WriteXdmfFile=1 |
104 changes: 67 additions & 37 deletions
104
Support/PrebuiltPipelines/Workshop/Reconstruction/(16) MicroTextureReconstruction.txt
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,70 +1,100 @@ | ||
| [PipelineBuilder] | ||
| Number_Filters=9 | ||
| Name=(16) MicroTextureReconstruction | ||
| Number_Filters=9 | ||
| Version=5.0.6545 | ||
|
|
||
| [0] | ||
| Filter_Name=ReadH5Ebsd | ||
| Filter_Human_Label=Read H5Ebsd File | ||
| DataContainerName=VolumeDataContainer | ||
| CellAttributeMatrixName=CellData | ||
| CellEnsembleAttributeMatrixName=CellEnsembleData | ||
| InputFile=Data/Microtexture/MicrotexturedTi.h5ebsd | ||
| RefFrameZDir=2 | ||
| ZStartIndex=0 | ||
| ZEndIndex=0 | ||
| UseTransformations=true | ||
| ArraySelections_VoxelCell\size=6 | ||
| ArraySelections_VoxelCell\1\VoxelCell=Confidence Index | ||
| ArraySelections_VoxelCell\2\VoxelCell=EulerAngles | ||
| ArraySelections_VoxelCell\3\VoxelCell=Fit | ||
| ArraySelections_VoxelCell\4\VoxelCell=Image Quality | ||
| ArraySelections_VoxelCell\5\VoxelCell=Phases | ||
| ArraySelections_VoxelCell\6\VoxelCell=SEM Signal | ||
| ArraySelections_VoxelField\size=0 | ||
| ArraySelections_VoxelEnsemble\size=3 | ||
| ArraySelections_VoxelEnsemble\1\VoxelEnsemble=CrystalStructures | ||
| ArraySelections_VoxelEnsemble\2\VoxelEnsemble=LatticeConstants | ||
| ArraySelections_VoxelEnsemble\3\VoxelEnsemble=MaterialName | ||
| ArraySelections_SurfaceMeshPoint\size=0 | ||
| ArraySelections_SurfaceMeshFace\size=0 | ||
| ArraySelections_SurfaceMeshEdge\size=0 | ||
| ArraySelections_SolidMeshPoint\size=0 | ||
| ArraySelections_SolidMeshFace\size=0 | ||
| ArraySelections_SolidMeshEnsemble\size=0 | ||
| UseTransformations=1 | ||
| ArraySelections_SelectedArrayNames\size=6 | ||
| ArraySelections_SelectedArrayNames\1\SelectedArrayNames=EulerAngles | ||
| ArraySelections_SelectedArrayNames\2\SelectedArrayNames=Phases | ||
| ArraySelections_SelectedArrayNames\3\SelectedArrayNames=SEM Signal | ||
| ArraySelections_SelectedArrayNames\4\SelectedArrayNames=Confidence Index | ||
| ArraySelections_SelectedArrayNames\5\SelectedArrayNames=Fit | ||
| ArraySelections_SelectedArrayNames\6\SelectedArrayNames=Image Quality | ||
|
|
||
| [1] | ||
| Filter_Name=SingleThresholdCells | ||
| SelectedCellArrayName=Confidence Index | ||
| ComparisonOperator=1 | ||
| ComparisonValue=0 | ||
| OutputArrayName=GoodVoxels | ||
| Filter_Name=MultiThresholdObjects | ||
| Filter_Human_Label=Threshold Objects | ||
| DestinationArrayName=GoodVoxels | ||
| SelectedThresholds\size=1 | ||
| SelectedThresholds\1\DataContainerName=VolumeDataContainer | ||
| SelectedThresholds\1\AttributeMatrixName=CellData | ||
| SelectedThresholds\1\AttributeArrayName=Confidence Index | ||
| SelectedThresholds\1\CompOperator=1 | ||
| SelectedThresholds\1\CompValue=0 | ||
|
|
||
| [2] | ||
| Filter_Name=FindCellQuats | ||
| Filter_Human_Label=Find Cell Quaternions | ||
| QuatsArrayName=Quats | ||
| CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
| CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
| CellEulerAnglesArrayPath=VolumeDataContainer|CellData|EulerAngles | ||
|
|
||
| [3] | ||
| Filter_Name=EBSDSegmentGrains | ||
| Filter_Name=EBSDSegmentFeatures | ||
| Filter_Human_Label=Segment Features (Misorientation) | ||
| CellFeatureAttributeMatrixName=CellFeatureData | ||
| ActiveArrayName=Active | ||
| FeatureIdsArrayName=FeatureIds | ||
| QuatsArrayPath=VolumeDataContainer|CellData|Quats | ||
| CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
| CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
| GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
| UseGoodVoxels=1 | ||
| MisorientationTolerance=5 | ||
|
|
||
| [4] | ||
| Filter_Name=RenameCellArray | ||
| SelectedCellArrayName=GrainIds | ||
| NewCellArrayName=GraindIds(Miso) | ||
| Filter_Name=RenameAttributeArray | ||
| Filter_Human_Label=Rename Attribute Array | ||
| SelectedArrayPath=VolumeDataContainer|CellData|FeatureIds | ||
| NewArrayName=GrainIds(Miso) | ||
|
|
||
| [5] | ||
| Filter_Name=CAxisSegmentGrains | ||
| MisorientationTolerance=15 | ||
| Filter_Name=CAxisSegmentFeatures | ||
| Filter_Human_Label=Segment Features (C-Axis Misorientation) | ||
| CellFeatureAttributeMatrixName=CellFeatureData_caxis | ||
| ActiveArrayName=Active | ||
| FeatureIdsArrayName=FeatureIds | ||
| QuatsArrayPath=VolumeDataContainer|CellData|Quats | ||
| CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
| CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
| GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
| UseGoodVoxels=1 | ||
| MisorientationTolerance=5 | ||
|
|
||
| [6] | ||
| Filter_Name=RenameCellArray | ||
| SelectedCellArrayName=GrainIds | ||
| NewCellArrayName=GrainIds(C-Axis) | ||
| Filter_Name=RenameAttributeArray | ||
| Filter_Human_Label=Rename Attribute Array | ||
| SelectedArrayPath=VolumeDataContainer|CellData|FeatureIds | ||
| NewArrayName=GrainIDs(C-Axis) | ||
|
|
||
| [7] | ||
| Filter_Name=GenerateIPFColors | ||
| Filter_Human_Label=Generate IPF Colors | ||
| UseGoodVoxels=0 | ||
| GoodVoxelsArrayPath=VolumeDataContainer|CellData|GoodVoxels | ||
| CrystalStructuresArrayPath=VolumeDataContainer|CellEnsembleData|CrystalStructures | ||
| CellEulerAnglesArrayPath=VolumeDataContainer|CellData|EulerAngles | ||
| CellPhasesArrayPath=VolumeDataContainer|CellData|Phases | ||
| CellIPFColorsArrayName=IPFColor | ||
| ReferenceDir\size=3 | ||
| ReferenceDir\1\x=0 | ||
| ReferenceDir\2\y=0 | ||
| ReferenceDir\3\z=1 | ||
|
|
||
| [8] | ||
| Filter_Name=DataContainerWriter | ||
| Filter_Human_Label=Write DREAM3D Data File | ||
| OutputFile=Data/Output/MicrotexturedTi.dream3d | ||
| WriteVoxelData=true | ||
| WriteSurfaceMeshData=false | ||
| WriteXdmfFile=true | ||
| WriteXdmfFile=1 |