push-notebook #63
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| name: notebook_to_md (general) | |
| on: | |
| # External webhook trigger | |
| repository_dispatch: | |
| types: [push-notebook] | |
| jobs: | |
| commit-notebooks: | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: Checkout site | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: recursive # Fetch Hugo themes and all extra projects | |
| fetch-depth: 0 # Fetch all history for .GitInfo and .Lastmod | |
| path: site | |
| - name: Checkout coast | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: British-Oceanographic-Data-Centre/COAsT | |
| ref: develop | |
| path: external | |
| - name: Prepare environement | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| activate-environment: coast | |
| environment-file: external/environment.yml | |
| - name: prep exec notebooks | |
| run: | | |
| conda info | |
| conda list | |
| conda config --show | |
| cd $GITHUB_WORKSPACE/external | |
| sudo apt install wget unzip -y | |
| wget -q https://linkedsystems.uk/erddap/files/COAsT_example_files/COAsT_example_files.zip | |
| unzip COAsT_example_files.zip && mv COAsT_example_files ./example_scripts/notebook_tutorials/runnable_notebooks/general/example_files | |
| ls /home/runner/work/COAsT-site/COAsT-site/external/example_scripts/notebook_tutorials/runnable_notebooks/general/example_files | |
| mkdir -p ./example_scripts/notebook_tutorials/markdown/general | |
| ls ./example_scripts/notebook_tutorials | |
| pip install . | |
| sudo apt-get update | |
| sudo apt-get install -y libgeos-dev | |
| pip install cartopy==0.21.0 | |
| mv config ./example_scripts/notebook_tutorials/runnable_notebooks/general/config | |
| bash notebook_to_md.sh general | |
| - name: convert notebooks | |
| run: | | |
| cd $GITHUB_WORKSPACE/external/example_scripts/notebook_tutorials/ | |
| ls ./markdown | |
| echo "Move general stuff markdown examples" | |
| mv ./markdown/general/export_to_netcdf_tutorial.md $GITHUB_WORKSPACE/site/content/en/docs/Examples/Notebooks/General/ | |
| mv ./markdown/general/seasonal_decomp_example.md $GITHUB_WORKSPACE/site/content/en/docs/Examples/Notebooks/General/ | |
| mv ./markdown/general/eof_tutorial.md $GITHUB_WORKSPACE/site/content/en/docs/Examples/Notebooks/General/ | |
| mv ./markdown/general/climatology_tutorial.md $GITHUB_WORKSPACE/site/content/en/docs/Examples/Notebooks/General/ | |
| mv ./markdown/general/dask_wrapper_template_tutorial.md $GITHUB_WORKSPACE/site/content/en/docs/Examples/Notebooks/General/ | |
| mv ./markdown/general/mask_maker_tutorial.md $GITHUB_WORKSPACE/site/content/en/docs/Examples/Notebooks/General/ | |
| mv ./markdown/general/polar_plotting.md $GITHUB_WORKSPACE/site/content/en/docs/Examples/Notebooks/General/ | |
| mv ./markdown/general/zarr_files.md $GITHUB_WORKSPACE/site/content/en/docs/Examples/Notebooks/General/ | |
| echo "Move images" | |
| rsync -r ./markdown_images/general/ $GITHUB_WORKSPACE/site/static | |
| - name: commit changes | |
| run: | | |
| cd $GITHUB_WORKSPACE/site | |
| git config --global user.name "MarkDownBot" | |
| git config --global author.name "MarkDownBot" | |
| git config --global user.email "[email protected]" | |
| git config --global author.email "[email protected]" | |
| git remote set-url origin https://x-access-token:${{ secrets.GITHUB_TOKEN }}@github.com/$GITHUB_REPOSITORY | |
| git fetch origin | |
| git checkout develop | |
| git pull | |
| git add content/en/docs/Examples/Notebooks/General/* | |
| git add static/* | |
| git commit -am "Updated General notebook pages from coast repo." | |
| git push origin develop |