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fix: pipeline name for spoooker
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kelly-sovacool committed Sep 10, 2024
1 parent d436515 commit b78a111
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2 changes: 1 addition & 1 deletion workflow/Snakefile
Original file line number Diff line number Diff line change
Expand Up @@ -86,7 +86,7 @@ rule all:

# create jobby tables
jobby_cmd = 'run_jobby_on_snakemake_log logs/snakemake.log | tee logs/snakemake.log.jobby | cut -f2,3,18 > logs/snakemake.log.jobby.short'
spook_cmd = f'spooker {WORKDIR} CARLISLE'
spook_cmd = f'spooker {WORKDIR} ASPEN'

onsuccess:
#subprocess.run(shlex.split(jobby_cmd),capture_output=False,shell=False,text=True)
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