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rewrite bash run script in python #1

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kelly-sovacool opened this issue May 29, 2024 · 0 comments
Open

rewrite bash run script in python #1

kelly-sovacool opened this issue May 29, 2024 · 0 comments
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@kelly-sovacool
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kelly-sovacool commented May 29, 2024

python is easier to write, test, and maintain

I would also like to add features such as setting the singularity cachedir, optionally copying sifs from a shared location, parsing config & tsv files for singularity bind paths, etc.

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