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Containerize major rules #42

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kopardev opened this issue Nov 28, 2022 · 3 comments · Fixed by #102
Closed
2 of 6 tasks

Containerize major rules #42

kopardev opened this issue Nov 28, 2022 · 3 comments · Fixed by #102
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@kopardev
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ccbr1325 charlie
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2024-03

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kopardev commented Nov 28, 2022 •
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BIOWULF keeps discontinuing certain tools without prior notice. Hence containerize tools to avoid breaking rules of the pipeline.

  • CircExplorer
  • CIRI
  • CLEAR
  • NCLscan
  • MapSplice
  • DCC
@kopardev kopardev self-assigned this Nov 28, 2022
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CircExplorer and CLEAR are both available in nciccbr/ccbr_circexplorer:latest

@kopardev kopardev modified the milestones: 2023w41_1013, 2023w42_1020 Oct 9, 2023
@kopardev kopardev modified the milestones: 2023w42_1020, 2023w43_1027 Oct 23, 2023
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kopardev commented Feb 7, 2024 •
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  • ask Joe to re-submit it as new project
  • assign to Kelly

@kopardev kopardev modified the milestones: 2023w43_1027, 2023-10, 2023-03, 2024-03 Feb 8, 2024
@kelly-sovacool kelly-sovacool mentioned this issue Mar 28, 2024
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@kelly-sovacool kelly-sovacool mentioned this issue Apr 18, 2024
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Moved to ccbr1325

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ccbr1325 charlie
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create Docker containers and remove envmodules CCBR/CHARLIE
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@kopardev