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Refactor samplesheet based on CHAMPAGNE #41

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kelly-sovacool opened this issue May 3, 2024 · 1 comment · May be fixed by #44
Open

Refactor samplesheet based on CHAMPAGNE #41

kelly-sovacool opened this issue May 3, 2024 · 1 comment · May be fixed by #44
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enhancement New feature or request LowPriority
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2024-09

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kelly-sovacool commented May 3, 2024 •
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allow for multiple time points compared to day 0, with each set of samples having one or more controls for day 0.

see Nathan's example data in /data/CCBR/projects/ccbr1323/CRISPRSeq_screens/fastq
@kelly-sovacool kelly-sovacool self-assigned this May 3, 2024
@kelly-sovacool kelly-sovacool added the enhancement New feature or request label May 3, 2024
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this approach supersedes #31

@kelly-sovacool kelly-sovacool added this to the 2024-05 milestone May 17, 2024
@kelly-sovacool kelly-sovacool linked a pull request Jul 1, 2024 that will close this issue
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@kelly-sovacool kelly-sovacool modified the milestones: 2024-05, 2024-07 Jul 11, 2024
@kelly-sovacool kelly-sovacool modified the milestones: 2024-07, 2024-09 Sep 13, 2024
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enhancement New feature or request LowPriority
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Refactor samplesheet to handle multiple treatments & controls CCBR/CRISPIN
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@kopardev @kelly-sovacool