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Refactor samplesheet to handle multiple treatments & controls #44

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Refactor samplesheet to handle multiple treatments & controls #44

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Commits on May 23, 2024

  1. fix: update groovy code for running spooker from champagne

    @kelly-sovacool
    kelly-sovacool committed May 23, 2024
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  2. fix: biowulf has depreceated SLURM_JOBID in favor of SLURM_JOB_ID

    @kelly-sovacool
    kelly-sovacool committed May 23, 2024
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  3. feat!: handle multiple treatments & controls in samplesheet check

    @kelly-sovacool
    kelly-sovacool committed May 23, 2024
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  4. fix: reduce stringency of fastq extension

    @kelly-sovacool
    kelly-sovacool committed May 23, 2024
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  5. chore: note that onComplete should create log dir if DNE

    @kelly-sovacool
    kelly-sovacool committed May 23, 2024
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  6. feat: [WIP] combine treatments & controls into one channel

    @kelly-sovacool
    kelly-sovacool committed May 23, 2024
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Commits on May 28, 2024

  1. fix: run processes after mageck count once per control

    @kelly-sovacool
    kelly-sovacool committed May 28, 2024
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Commits on Sep 12, 2024

  1. Merge branch 'main' into iss-41

    @kelly-sovacool
    kelly-sovacool authored Sep 12, 2024
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