updating runtime for summaries

CCMS-UCSD · Oct 3, 2020 · 725f6b1 · 725f6b1
1 parent 967cd2a
commit 725f6b1
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Showing 3 changed files with 4 additions and 3 deletions.
diff --git a/feature-based-molecular-networking/feature-based-molecular-networking/tool.xml b/feature-based-molecular-networking/feature-based-molecular-networking/tool.xml
@@ -1,7 +1,7 @@
 <toolset>
 
     <!-- File Summary -->
-    <pathSet base="anaconda3/bin">
+    <pathSet base="miniconda3_gamma/bin">
         <toolPath tool="filesummary" path="python" />
     </pathSet>
     <pathSet base="$base/scripts">

diff --git a/feature-based-molecular-networking/test-integration-workflow/test_tasks.csv b/feature-based-molecular-networking/test-integration-workflow/test_tasks.csv
@@ -16,4 +16,5 @@ d0b5249f7d69443a8adcb9e43ebcc0a2,fbmn IIN,view_all_clusters_withID
 442ca23c0d2d4dc8a206ea3f5228b399,fbmn XCMS3 IIN,view_all_clusters_withID
 5aa16b927ed74d64a9d32e2c5f141939,fbmn MS-DIAL IIN,view_all_clusters_withID
 64b22841ab3548f987b3cfc18696a581,fbmn with stats and plots,view_all_clusters_withID;network_stats_selected_columns;network_stats_all_columns
-8c6b9e069b5843229e0902fd55086022,fbmn with blank molecules pre-removed,
+8c6b9e069b5843229e0902fd55086022,fbmn with blank molecules pre-removed,
+d513e6923920413a89f1669b16117e1d,fbmn with mzML files,file_summary
diff --git a/metabolomics-snets-v2/metabolomics-snets-v2/tool.xml b/metabolomics-snets-v2/metabolomics-snets-v2/tool.xml
@@ -1,7 +1,7 @@
 <toolset>
 
     <!-- File Summary -->
-    <pathSet base="anaconda3/bin">
+    <pathSet base="miniconda3_gamma/bin">
         <toolPath tool="filesummary" path="python" />
     </pathSet>
     <pathSet base="$base/scripts">