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Refactored to extract functions and reuse utils + clean up
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,13 +1,19 @@ | ||
| #!/bin/bash | ||
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| source ./utils.sh | ||
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| client= | ||
| audience=https://epicproxy-np.et0502.epichosted.com/FhirProxy/oauth2/token | ||
| secret=/path/to/ucsd-epic-private-key.pem | ||
| root=$CDCTI_HOME/examples/CA/ | ||
| fpath="$1" | ||
| shift | ||
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| jwt_token=$(generate_jwt "$client" "$audience" "$secret") || fail "Failed to generate JWT token" | ||
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| hurl \ | ||
| --variable fpath=$fpath \ | ||
| --file-root $root \ | ||
| --variable jwt=$(jwt encode --exp='+5min' --jti $(uuidgen) --alg RS256 -k $client -i $client -s $client -a $audience --no-iat -S @$secret) \ | ||
| --variable "fpath=$fpath" \ | ||
| --file-root "$root" \ | ||
| --variable "jwt=$jwt_token" \ | ||
| epic/results.hurl \ | ||
| $@ |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,131 +1,102 @@ | ||
| #!/bin/bash | ||
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| # Check if $CDCTI_HOME is set | ||
| if [ -z "$CDCTI_HOME" ]; then | ||
| echo "Error: CDCTI_HOME is not set. Please set this environment variable before running the script." | ||
| exit 1 | ||
| fi | ||
| source ./utils.sh | ||
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| LOCAL_KEY_PATH="$CDCTI_HOME/mock_credentials/organization-trusted-intermediary-private-key-local.pem" | ||
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| # default values | ||
| env=local | ||
| root=$CDCTI_HOME/examples/ | ||
| content_type=application/hl7-v2 | ||
| client_id=flexion | ||
| client_sender=simulated-sender | ||
| verbose="" | ||
| submission_id="" | ||
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| show_help() { | ||
| echo "Usage: $(basename $0) <ENDPOINT_NAME> [OPTIONS]" | ||
| echo | ||
| echo "Options:" | ||
| echo " -f <REL_PATH> The path to the hl7/fhir file to submit, relative the root path (Required for waters API)" | ||
| echo " -r <ROOT_PATH> The root path to the hl7/fhir files (Default: $root)" | ||
| echo " -t <CONTENT_TYPE> The content type for the message (e.g. 'application/hl7-v2' or 'application/fhir+ndjson') (Default: $content_type)" | ||
| echo " -e [local | staging | production ] The environment to run the test in (Default: $env)" | ||
| echo " -c <CLIENT_ID> The client id to use (Default: $client_id)" | ||
| echo " -s <CLIENT_SENDER> The client sender to use (Default: $client_sender)" | ||
| echo " -x <KEY_PATH> The path to the client private key for the environment" | ||
| echo " -i <SUBMISSION_ID> The submissionId to call the history API with (Required for history API)" | ||
| echo " -v Verbose mode" | ||
| echo " -h Display this help and exit" | ||
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| show_usage() { | ||
| cat <<EOF | ||
| Usage: $(basename "$0") <ENDPOINT_NAME> [OPTIONS] | ||
| ENDPOINT_NAME: | ||
| The name of the endpoint to call (required) | ||
| Options: | ||
| -f <REL_PATH> Path to the hl7/fhir file to submit (Required for waters API) | ||
| -r <ROOT_PATH> Root path to the hl7/fhir files (Default: $root) | ||
| -t <CONTENT_TYPE> Content type for the message (Default: $content_type) | ||
| -e <ENVIRONMENT> Environment: local|staging|production (Default: $env) | ||
| -c <CLIENT_ID> Client ID (Default: $client_id) | ||
| -s <CLIENT_SENDER> Client sender (Default: $client_sender) | ||
| -x <KEY_PATH> Path to the client private key | ||
| -i <SUBMISSION_ID> Submission ID for history API | ||
| -v Verbose mode | ||
| -h Display this help and exit | ||
| Environment Variables: | ||
| CDCTI_HOME Base directory for CDC TI repository (Required) | ||
| EOF | ||
| } | ||
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| # Check if required ENDPOINT_NAME is provided | ||
| if [ $# -eq 0 ]; then | ||
| echo "Error: Missing required argument <ENDPOINT_NAME>" | ||
| show_help | ||
| exit 1 | ||
| fi | ||
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| # Check if first argument is -h | ||
| if [ "$1" = "-h" ]; then | ||
| show_help | ||
| exit 0 | ||
| fi | ||
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| endpoint_name=rs/"$1".hurl # Assign the first argument to endpoint_name | ||
| shift # Remove the first argument from the list of arguments | ||
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| while getopts ':f:r:t:e:c:s:x:i:vh' opt; do | ||
| case "$opt" in | ||
| f) | ||
| fpath="$OPTARG" | ||
| ;; | ||
| r) | ||
| root="$OPTARG" | ||
| ;; | ||
| t) | ||
| content_type="$OPTARG" | ||
| ;; | ||
| e) | ||
| env="$OPTARG" | ||
| ;; | ||
| c) | ||
| client_id="$OPTARG" | ||
| ;; | ||
| s) | ||
| client_sender="$OPTARG" | ||
| ;; | ||
| x) | ||
| secret="$OPTARG" | ||
| ;; | ||
| i) | ||
| submission_id="--variable submissionid=$OPTARG" | ||
| ;; | ||
| v) | ||
| verbose="--verbose" | ||
| ;; | ||
| h) | ||
| show_help | ||
| parse_arguments() { | ||
| if [ "$1" = "-h" ] || [ "$1" = "--help" ]; then | ||
| show_usage | ||
| exit 0 | ||
| ;; | ||
| :) | ||
| echo -e "Option requires an argument" | ||
| show_help | ||
| exit 1 | ||
| ;; | ||
| ?) | ||
| echo -e "Invalid command option" | ||
| show_help | ||
| exit 1 | ||
| ;; | ||
| esac | ||
| done | ||
| shift "$(($OPTIND - 1))" | ||
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| if [ "$env" = "local" ]; then | ||
| host=localhost | ||
| url=http://$host:7071 | ||
| if [ -z "$secret" ] && [ "$client_id" = "flexion" ]; then | ||
| secret="$CDCTI_HOME/mock_credentials/organization-trusted-intermediary-private-key-local.pem" | ||
| fi | ||
| elif [ "$env" = "staging" ]; then | ||
| host=staging.prime.cdc.gov | ||
| url=https://$host:443 | ||
| elif [ "$env" = "production" ]; then | ||
| host=prime.cdc.gov | ||
| url=https://$host:443 | ||
| else | ||
| echo "Error: Invalid environment $env" | ||
| show_help | ||
| exit 1 | ||
| fi | ||
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| if [ -z "$secret" ]; then | ||
| echo "Error: Please provide the private key for $client_id" | ||
| exit 1 | ||
| fi | ||
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| hurl \ | ||
| --variable fpath=$fpath \ | ||
| --file-root $root \ | ||
| --variable url=$url \ | ||
| --variable content-type=$content_type \ | ||
| --variable client-id=$client_id \ | ||
| --variable client-sender=$client_sender \ | ||
| --variable jwt=$(jwt encode --exp='+5min' --jti $(uuidgen) --alg RS256 -k $client_id.$client_sender -i $client_id.$client_sender -s $client_id.$client_sender -a $host --no-iat -S @$secret) \ | ||
| $submission_id \ | ||
| $verbose \ | ||
| $endpoint_name \ | ||
| $@ | ||
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| [ $# -eq 0 ] && fail "Missing required argument <ENDPOINT_NAME>" | ||
| endpoint_name="rs/$1.hurl" | ||
| shift # Remove endpoint name from args | ||
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| while getopts ':f:r:t:e:c:s:x:i:v' opt; do | ||
| case "$opt" in | ||
| f) fpath="$OPTARG" ;; | ||
| r) root="$OPTARG" ;; | ||
| t) content_type="$OPTARG" ;; | ||
| e) env="$OPTARG" ;; | ||
| c) client_id="$OPTARG" ;; | ||
| s) client_sender="$OPTARG" ;; | ||
| x) secret="$OPTARG" ;; | ||
| i) submission_id="--variable submissionid=$OPTARG" ;; | ||
| v) verbose="--verbose" ;; | ||
| ?) fail "Invalid option -$OPTARG" ;; | ||
| esac | ||
| done | ||
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| shift "$(($OPTIND - 1))" | ||
| remaining_args="$*" | ||
| } | ||
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| setup_credentials() { | ||
| if [ -z "$secret" ] && [ "$client_id" = "flexion" ] && [ "$env" = "local" ]; then | ||
| if [ -f "$LOCAL_KEY_PATH" ]; then | ||
| secret="$LOCAL_KEY_PATH" | ||
| else | ||
| fail "Local environment key not found at: $LOCAL_KEY_PATH" | ||
| fi | ||
| fi | ||
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| [ -n "$secret" ] || fail "Please provide the private key for $client_id" | ||
| [ -f "$secret" ] || fail "Private key file not found: $secret" | ||
| } | ||
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| run_hurl_command() { | ||
| url=$(get_api_url "$env" "rs") | ||
| host=$(extract_host_from_url "$url") | ||
| jwt_token=$(generate_jwt "$client_id.$client_sender" "$host" "$secret") || fail "Failed to generate JWT token" | ||
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| hurl \ | ||
| --variable "fpath=$fpath" \ | ||
| --file-root "$root" \ | ||
| --variable "url=$url" \ | ||
| --variable "content-type=$content_type" \ | ||
| --variable "client-id=$client_id" \ | ||
| --variable "client-sender=$client_sender" \ | ||
| --variable "jwt=$jwt_token" \ | ||
| ${submission_id:-} \ | ||
| ${verbose:-} \ | ||
| "$endpoint_name" \ | ||
| ${remaining_args:+$remaining_args} | ||
| } | ||
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| check_env_vars CDCTI_HOME | ||
| parse_arguments "$@" | ||
| setup_credentials | ||
| run_hurl_command |
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