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Update Compy #356

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Mar 18, 2021
Merged

Update Compy #356

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8 changes: 4 additions & 4 deletions configuration/scripts/icepack.batch.csh
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Original file line number Diff line number Diff line change
Expand Up @@ -113,14 +113,14 @@ cat >> ${jobfile} << EOFB
EOFB

else if (${ICE_MACHINE} =~ compy*) then
@ nthrds2 = ${nthrds} * 2
cat >> ${jobfile} << EOFB
#SBATCH -J ${ICE_CASENAME}
#SBATCH -A ${acct}
#SBATCH --qos shared
#SBATCH --ntasks ${ncores}
#SBATCH --qos ${ICE_MACHINE_QUEUE}
#SBATCH --time ${ICE_RUNLENGTH}
#SBATCH --cpus-per-task ${nthrds2}
#SBATCH --nodes ${nnodes}
#SBATCH --ntasks ${ntasks}
#SBATCH --cpus-per-task ${nthrds}
###SBATCH -e filename
###SBATCH -o filename
###SBATCH --mail-type FAIL
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17 changes: 7 additions & 10 deletions configuration/scripts/machines/env.compy_intel
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Expand Up @@ -10,33 +10,30 @@ if ("$inp" != "-nomodules") then
source /share/apps/modules/init/csh

module purge
module load intel/19.0.3
module load gcc/8.1.0
module load intelmpi/2019u3
module load intel/19.0.5
#module load intelmpi/2019u4
module load netcdf/4.6.3
module load hdf5/1.10.5

#setenv NETCDF_PATH ${NETCDF_DIR}
setenv NETCDF_PATH /share/apps/netcdf/4.6.3/intel/19.0.3
setenv OMP_PROC_BIND true
setenv OMP_PLACES threads
setenv NETCDF_PATH /share/apps/netcdf/4.6.3/intel/19.0.5
limit coredumpsize unlimited
limit stacksize unlimited

endif

setenv ICE_MACHINE_MACHNAME compy
setenv ICE_MACHINE_MACHINFO "intel/19.0.3 gcc/8.1.0 intelmpi/2019u3 netcdf/4.6.3"
setenv ICE_MACHINE_MACHINFO "PNNL Intel Xeon Skylake with 192 GB of DDR4 DRAM"
setenv ICE_MACHINE_ENVNAME intel
setenv ICE_MACHINE_ENVINFO "ifort 19.0.3"
setenv ICE_MACHINE_ENVINFO "intel/19.0.5"
setenv ICE_MACHINE_MAKE gmake
setenv ICE_MACHINE_WKDIR /compyfs/$USER/ICEPACK_RUNS
setenv ICE_MACHINE_INPUTDATA /compyfs/inputdata/cice-consortium/
setenv ICE_MACHINE_BASELINE /compyfs/$USER/ICEPACK_BASELINE
setenv ICE_MACHINE_SUBMIT "sbatch "
setenv ICE_MACHINE_ACCT e3sm
setenv ICE_MACHINE_QUEUE "regular"
setenv ICE_MACHINE_TPNODE 32 # tasks per node
setenv ICE_MACHINE_QUEUE "short"
setenv ICE_MACHINE_TPNODE 40 # tasks per node
setenv ICE_MACHINE_BLDTHRDS 4
setenv ICE_MACHINE_QSTAT "squeue --jobs="