The goals of the CINECA project Work Package 4 is to develop a common framework for running federated genomics analyses and to implement several demonstrator pipelines using that framework. The components developed by the work package are listed below. Links lead to detailed descriptions.
| # | Task | MS or D | Due | Done |
|---|---|---|---|---|
| 4.1 | Report on data sharing model | D4.1 | 2019-12 | on time |
| 4.2 | Technical framework for performing federated analyses | D4.2 | 2020-12 | on time |
| 4.3 | Specific federated analysis applications developed using the framework | MS4.2 | 2020-12 | 2021-03 |
| 4.3.1 | Joint cohort variant genotyping | MS4.3 | 2020-12 | 2021-03 |
| 4.3.2 | Analysis of GWAS and sequencing data | D4.3 | 2022-12 | |
| 4.3.3 | Genetic analysis of sequencing-based phenotypes | MS4.4 / D4.4 | 2021-12 / 2022-12 |
Complete mappings between components, tasks, subtasks, milestones, and deliverables can be found on this page.