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Add input SV vcf for vcf_rerun to qc_sample_info #548

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henrikstranneheim opened this issue Aug 23, 2018 · 1 comment
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Add input SV vcf for vcf_rerun to qc_sample_info #548

henrikstranneheim opened this issue Aug 23, 2018 · 1 comment
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@henrikstranneheim henrikstranneheim self-assigned this Aug 23, 2018
henrikstranneheim added a commit that referenced this issue Aug 27, 2018
@henrikstranneheim
Added sv_annotate for vcf-rerun reannotation. Fix #548
8264b9d 
Add input SV vcf for vcf_rerun to qc_sample_info.
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Added as:

sv_combinevariantcallsets:
    path: FID_SV.0.stderr.txt
    sv_bcf_file:
      path: FID.bcf

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