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@DCAN-Labs

Developmental Cognition and Neuroimaging Labs

Our lab uses MRI to examine typical and atypical brain development. Our research is examining children with ASD as well as children and adults with ADHD.

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  1. BWAS BWAS Public

    Code to run Brain Wide Association Studies to derive PolyNeuro Risk Scores

    MATLAB 2 1

  2. biceps biceps Public

    Brain Imaging Connectivity Extraction Program Solution

    C

  3. BIBSnet BIBSnet Public

    This BIDS App provides the utility of creating a nnU-Net anatomical MRI segmentation and mask with a infant brain trained model. It can easily be included in other processing pipelines and for circ…

    Python 3 8

  4. CABINET CABINET Public

    CABINET is a utility that standardizes subsequent container execution. Emphasizing reproducibility, users can share JSONs to exactly replicate how containerized processes follow each other.

    Python 1 1

  5. abcd-hcp-pipeline abcd-hcp-pipeline Public

    bids application for processing functional MRI data, robust to scanner, acquisition and age variability.

    Python 50 19

  6. infant-abcd-bids-pipeline infant-abcd-bids-pipeline Public

    Human infant pipeline, based on abcd-hcp-pipeline, to process fMRI data.

    Python 8 4

Repositories

Showing 10 of 126 repositories
  • Seg-Model-Creation-GUI Public

    A user interface for nNUnet model training

    DCAN-Labs/Seg-Model-Creation-GUI’s past year of commit activity
    Python 0 BSD-2-Clause 1 0 0 Updated Oct 6, 2024
  • dcan_bold_processing Public

    functional connectivity preprocessing for resting state fMRI outputs of the dcan-fmri-pipelines

    DCAN-Labs/dcan_bold_processing’s past year of commit activity
    MATLAB 7 BSD-3-Clause 7 4 1 Updated Oct 4, 2024
  • cdni-brain Public

    readthedocs for CDNI collaborators and members

    DCAN-Labs/cdni-brain’s past year of commit activity
    3 2 18 1 Updated Oct 4, 2024
  • automated-subset-analysis Public

    Automated split-half subset reliability analysis scripts written for the ABCD resource paper.

    DCAN-Labs/automated-subset-analysis’s past year of commit activity
    Python 1 1 0 0 Updated Oct 3, 2024
  • loes-scoring-2 Public

    Code for automated Loes scoring.

    DCAN-Labs/loes-scoring-2’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 0 0 0 Updated Sep 30, 2024
  • infant-abcd-bids-pipeline Public

    Human infant pipeline, based on abcd-hcp-pipeline, to process fMRI data.

    DCAN-Labs/infant-abcd-bids-pipeline’s past year of commit activity
    Python 8 BSD-3-Clause 4 0 0 Updated Sep 27, 2024
  • external-software Public

    Tools needed for the DCAN Labs pipelines that we didn't write.

    DCAN-Labs/external-software’s past year of commit activity
    Dockerfile 1 BSD-3-Clause 1 0 0 Updated Sep 27, 2024
  • DCAN-Labs/abcc_automated_QC’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Sep 26, 2024
  • BrainSwipes Public

    A crowdsource quality assurance application for use with neuroimaging datasets.

    DCAN-Labs/BrainSwipes’s past year of commit activity
    Vue 0 Apache-2.0 1 8 0 Updated Sep 26, 2024
  • internal-tools Public

    Tools written by DCAN Labs and used, in common, by the DCAN pipelines.

    DCAN-Labs/internal-tools’s past year of commit activity
    Dockerfile 1 BSD-3-Clause 0 0 0 Updated Sep 25, 2024

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