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1. genomic_epi genomic_epi Public

   A collection of miscellaneous scripts for Genomic Epidemiology purposes

   R

2. wastewater_surveillance wastewater_surveillance Public

   Scripts to analyze wastewater sequencing data from Freyja pipeline and create files used as input for Data-Flo/Microreact Dashboard

   Python

3. wa_sc2 wa_sc2 Public

   WA-focused build for ncov Nextstrain

   Python

4. wa_mpxv wa_mpxv Public

   Files for WA-Focused mpxv nextstrain build

   Python