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machines: eccc: update our machine files (CICE-Consortium#725)
A few notes: - We do need to request memory even on machines where we have excluseive node access. 20 GB was chosen rather arbitrarily. - We set umask to 022 to make the <jobname>.o and <jobname>.e files readable by group and others. - We use the minimal SSM package for the compiler and Intel MPI, but we keep the setup using environment modules commented if ever we need to weak things (i.e. I_MPI_LIBRARY_KIND) - We set OMP_STACKSIZE. Since d1e972a (Update OMP (CICE-Consortium#680), 2022-02-18), OpenMP threading is active in 'ice_transport_remap.F90', and the default OpenMP stack size needs to be adjusted to avoid stack overflows. We set it to a 64 Mb size as used for other machines. Also, remove dead code setting 'CICE_ACCT'. This variable was last used in 98e0307 (Update scripts, rename variables from CICE_ to ICE_ to be more reusable in icepack., 2017-09-15), and so did not do anything for any of the machines that were using it after that commit. Remove code in machines env files that was setting it based on '~/.cice_proj'. A few notes specific to 'gpsc3': - Since we use an '--export' directive to choose which environment variables are exported to the job environment by SLURM, SSMUSE_BASE and SSMUSE_PATH are not present in the environnement and loading domains without their full paths fails on csh, so use a full path. - We use the compiler package from main/opt instead of eccc/all/opt since we do not need the EC-specific variables to be set (and it also leads to job failures since BASE_ARCH is not defined).
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,49 @@ | ||
| #============================================================================== | ||
| # Makefile macros for "ppp5" | ||
| #============================================================================== | ||
| # For use with intel compiler | ||
| #============================================================================== | ||
|
|
||
| CPP := fpp | ||
| CPPDEFS := -DFORTRANUNDERSCORE ${ICE_CPPDEFS} | ||
| CFLAGS := -c -O2 -fp-model precise | ||
| #-xHost | ||
|
|
||
| FIXEDFLAGS := -132 | ||
| FREEFLAGS := -FR | ||
| FFLAGS := -fp-model source -convert big_endian -assume byterecl -ftz -traceback -diag-disable 5140 -no-wrap-margin | ||
| #-xHost | ||
|
|
||
| ifeq ($(ICE_BLDDEBUG), true) | ||
| FFLAGS += -O0 -g -check -fpe0 -ftrapuv -fp-model except -check noarg_temp_created -check nooutput_conversion -debug-parameters all | ||
| #-init=snan,arrays | ||
| # -heap-arrays 1024 | ||
| else | ||
| FFLAGS += -O2 | ||
| endif | ||
|
|
||
| SCC := icc | ||
| SFC := ifort | ||
| MPICC := mpiicc | ||
| MPIFC := mpiifort | ||
|
|
||
| ifeq ($(ICE_COMMDIR), mpi) | ||
| FC := $(MPIFC) | ||
| CC := $(MPICC) | ||
| else | ||
| FC := $(SFC) | ||
| CC := $(SCC) | ||
| endif | ||
| LD:= $(FC) | ||
|
|
||
| ifeq ($(ICE_IOTYPE), netcdf) | ||
| INCLDIR += $(shell nf-config --fflags) | ||
| SLIBS := $(shell nf-config --flibs) | ||
| endif | ||
|
|
||
| ifeq ($(ICE_THREADED), true) | ||
| LDFLAGS += -qopenmp | ||
| CFLAGS += -qopenmp | ||
| FFLAGS += -qopenmp | ||
| endif | ||
|
|
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,44 @@ | ||
| #============================================================================== | ||
| # Makefile macros for ECCC ppp6 | ||
| #============================================================================== | ||
| # For use with GNU compiler | ||
| #============================================================================== | ||
|
|
||
| CPPDEFS := -DFORTRANUNDERSCORE ${ICE_CPPDEFS} | ||
| CFLAGS := -c -O2 | ||
| #-xHost | ||
|
|
||
| FREEFLAGS := -ffree-form | ||
| FFLAGS := -fconvert=big-endian -fbacktrace -ffree-line-length-none | ||
| #-xHost | ||
|
|
||
| ifeq ($(ICE_BLDDEBUG), true) | ||
| FFLAGS += -O0 -g -fcheck=bounds -finit-real=nan -fimplicit-none -ffpe-trap=invalid,zero,overflow | ||
| else | ||
| FFLAGS += -O2 | ||
| endif | ||
|
|
||
| SCC := gcc | ||
| SFC := gfortran | ||
| MPICC := mpicc | ||
| MPIFC := mpifort | ||
|
|
||
| ifeq ($(ICE_COMMDIR), mpi) | ||
| FC := $(MPIFC) | ||
| CC := $(MPICC) | ||
| else | ||
| FC := $(SFC) | ||
| CC := $(SCC) | ||
| endif | ||
| LD:= $(FC) | ||
|
|
||
| ifeq ($(ICE_IOTYPE), netcdf) | ||
| INCLDIR += $(shell nf-config --fflags) | ||
| SLIBS := $(shell nf-config --flibs) | ||
| endif | ||
|
|
||
| ifeq ($(ICE_THREADED), true) | ||
| LDFLAGS += -fopenmp | ||
| CFLAGS += -fopenmp | ||
| FFLAGS += -fopenmp | ||
| endif |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,44 @@ | ||
| #============================================================================== | ||
| # Makefile macros for ECCC ppp6 | ||
| #============================================================================== | ||
| # For use with GNU compiler | ||
| #============================================================================== | ||
|
|
||
| CPPDEFS := -DFORTRANUNDERSCORE ${ICE_CPPDEFS} | ||
| CFLAGS := -c -O2 | ||
| #-xHost | ||
|
|
||
| FREEFLAGS := -ffree-form | ||
| FFLAGS := -fconvert=big-endian -fbacktrace -ffree-line-length-none | ||
| #-xHost | ||
|
|
||
| ifeq ($(ICE_BLDDEBUG), true) | ||
| FFLAGS += -O0 -g -fcheck=bounds -finit-real=nan -fimplicit-none -ffpe-trap=invalid,zero,overflow | ||
| else | ||
| FFLAGS += -O2 | ||
| endif | ||
|
|
||
| SCC := gcc | ||
| SFC := gfortran | ||
| MPICC := mpicc | ||
| MPIFC := mpif90 | ||
|
|
||
| ifeq ($(ICE_COMMDIR), mpi) | ||
| FC := $(MPIFC) | ||
| CC := $(MPICC) | ||
| else | ||
| FC := $(SFC) | ||
| CC := $(SCC) | ||
| endif | ||
| LD:= $(FC) | ||
|
|
||
| ifeq ($(ICE_IOTYPE), netcdf) | ||
| INCLDIR += $(shell nf-config --fflags) | ||
| SLIBS := $(shell nf-config --flibs) | ||
| endif | ||
|
|
||
| ifeq ($(ICE_THREADED), true) | ||
| LDFLAGS += -fopenmp | ||
| CFLAGS += -fopenmp | ||
| FFLAGS += -fopenmp | ||
| endif |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,49 @@ | ||
| #============================================================================== | ||
| # Makefile macros for "ppp6" | ||
| #============================================================================== | ||
| # For use with intel compiler | ||
| #============================================================================== | ||
|
|
||
| CPP := fpp | ||
| CPPDEFS := -DFORTRANUNDERSCORE ${ICE_CPPDEFS} | ||
| CFLAGS := -c -O2 -fp-model precise | ||
| #-xHost | ||
|
|
||
| FIXEDFLAGS := -132 | ||
| FREEFLAGS := -FR | ||
| FFLAGS := -fp-model source -convert big_endian -assume byterecl -ftz -traceback -diag-disable 5140 -no-wrap-margin | ||
| #-xHost | ||
|
|
||
| ifeq ($(ICE_BLDDEBUG), true) | ||
| FFLAGS += -O0 -g -check -fpe0 -ftrapuv -fp-model except -check noarg_temp_created -check nooutput_conversion -debug-parameters all | ||
| #-init=snan,arrays | ||
| # -heap-arrays 1024 | ||
| else | ||
| FFLAGS += -O2 | ||
| endif | ||
|
|
||
| SCC := icc | ||
| SFC := ifort | ||
| MPICC := mpiicc | ||
| MPIFC := mpiifort | ||
|
|
||
| ifeq ($(ICE_COMMDIR), mpi) | ||
| FC := $(MPIFC) | ||
| CC := $(MPICC) | ||
| else | ||
| FC := $(SFC) | ||
| CC := $(SCC) | ||
| endif | ||
| LD:= $(FC) | ||
|
|
||
| ifeq ($(ICE_IOTYPE), netcdf) | ||
| INCLDIR += $(shell nf-config --fflags) | ||
| SLIBS := $(shell nf-config --flibs) | ||
| endif | ||
|
|
||
| ifeq ($(ICE_THREADED), true) | ||
| LDFLAGS += -qopenmp | ||
| CFLAGS += -qopenmp | ||
| FFLAGS += -qopenmp | ||
| endif | ||
|
|
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