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Merge pull request #2193 from EBISPOT/measurement_replacement
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First phase of OBA replacements
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zoependlington authored Mar 15, 2024
2 parents 38beb1e + 82b4f99 commit ef67be8
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Showing 12 changed files with 25,641 additions and 929 deletions.
675 changes: 377 additions & 298 deletions efo-base.owl

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6 changes: 3 additions & 3 deletions src/ontology/Makefile
Original file line number Diff line number Diff line change
Expand Up @@ -76,9 +76,9 @@ imports/hancestro_import.owl: mirror/hancestro.owl imports/hancestro_terms.txt $
$(ROBOT) extract -i $< -T imports/hancestro_terms.txt --method BOT -O $(BASE)/$@ -o $@
.PRECIOUS: imports/hancestro_import.owl

imports/oba_import.owl: imports/oba_bot.owl imports/oba_terms.txt $(SRC)
$(ROBOT) filter -i $< --term-file imports/oba_terms.txt --term RO:0000052 --select "annotations ontology anonymous self" --trim true --signature true -O $(BASE)/$@ -o $@
.PRECIOUS: imports/%_import.owl
#imports/oba_import.owl: imports/oba_bot.owl imports/oba_terms.txt $(SRC)
# $(ROBOT) filter -i $< --term-file imports/oba_terms.txt --term RO:0000052 --select "annotations ontology anonymous self" --trim true --signature true -O $(BASE)/$@ -o $@
#.PRECIOUS: imports/%_import.owl

# ----------------------------------------
# Pipeline for removing a merged ontology
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