[NOAA] NASA fork sync. (#37)

[FlorianDeconinck]

• Initialize GeosDycoreWrapper with bdt (timestep)

• Use GEOS version of constants

• 1. Add qcld to the list of tracers beings advected

2. Made GEOS specific changes to thresholds in saturation adjustment

• Accumulate diss_est

• Allow GEOS_WRAPPER to process device data

• Add clear to collector for 3rd party use. GEOS pass down timings to caller

• Make kernel analysis run a copy stencil to compute local bandwith Parametrize tool with backend, output format

• Move constant on a env var Add saturation adjustement threshold to const

• lint

• More linting

• Remove unused if leading to empty code block

• Restrict dace to 0.14.1 due to a parsing bug

• Add guard for bdt==0 Fix bad merge for bdt with GEOS_Wrapper

• Remove unused code

• Fix theroritical timings Lint

• Fixed a bug where pkz was being calculated twice, and the second calc was wrong

• Downgrade DaCe to 0.14.0 pending array aliasing fix

• Set default cache path for orchestrated DaCe to respect GT_CACHE_* env

• Remove previous per stencil override of default_build_folder

• Revert "Set default cache path for orchestrated DaCe to respect GT_CACHE_* env"

This reverts commit 4fc5b4d.

• Revert "Remove previous per stencil override of default_build_folder"

This reverts commit 2245027.

• Read cache_root in default dace backend

• Document faulty behavior with GT_CACHE_DIR_NAME

• Fix bad requirements syntax

• Check for the string value of CONST_VERSION directly instead of enum

• Protect constant selection more rigorusly. Clean abort on unknown constant given

• Log constants selection

• Refactor NQ to constants.py

• Replace all logger with pace_log Introduce PACE_LOGLEVEL to control log level from outside

• Code guidelines clean up

• Devops/GitHub actions on (Devops/GitHub actions on #15)

• Linting on PR

• Run main unit test

• Update python to available 3.8.12

• Remove cd to pace

• Lint: git submodule recursive

• Typo

• Add openmpi to the image

• Linting

• Fix unit tests (remove dxa, dya rely on halo ex)

• typo

• Change name of jobs

• Distributed compilation on orchestrated backend for NxN layouts (Distributed compilation on orchestrated backend for NxN layouts #14)

• Adapt orchestration distribute compile for NxN layout

• Remove debug code

• Add a more descriptive string base postfix for cache naming Identify the code path for all cases
  Consistent reload post-compile
  Create a central space for all caches generation logic No more original layout check required

• Add a test on caches relocatability

• Verbose todo

• Linting on PR

• Run main unit test

• Update python to available 3.8.12

• Remove cd to pace

• Lint: git submodule recursive

• Typo

• Add openmpi to the image

• Linting

• Fix unit tests (remove dxa, dya rely on halo ex)

• typo

• Change name of jobs

• Missing enum

• Lint imports

• Fix unit tests

• Deactivate relocability test due to Python crash Logged as issyue 16

• Typo

• Raise for 1,X and X,1 layouts which requires a new descriptor

• Added ak, bk for 137 levels in eta.py

• Add floating point precision to GEOS bridge init

• lint

• Add device PCI bus id (for MPS debug)

• Typo + lint

• Try to detect MPS reading the "log" pipe

• Lint

• Clean up

• Log info GEOS bridge (Log info GEOS bridge #18)

• Add floating point precision to GEOS bridge init

• lint

• Add device PCI bus id (for MPS debug)

• Typo + lint

• Try to detect MPS reading the "log" pipe

• Lint

• Clean up

• Update geos/develop to grab NOAA PR9 results (Update geos/develop to grab NOAA PR9 results #21)

• Verbose choice of block/grid size

• added build script for c5

• updated repo to NOAA

• GEOS integration ([orch:dace:X] bad reinterpret cast leads to NaN #9)

• Initialize GeosDycoreWrapper with bdt (timestep)

• Use GEOS version of constants

• 1. Add qcld to the list of tracers beings advected

2. Made GEOS specific changes to thresholds in saturation adjustment

• Accumulate diss_est

• Allow GEOS_WRAPPER to process device data

• Add clear to collector for 3rd party use. GEOS pass down timings to caller

• Make kernel analysis run a copy stencil to compute local bandwith Parametrize tool with backend, output format

• Move constant on a env var Add saturation adjustement threshold to const

• Remove unused if leading to empty code block

• Restrict dace to 0.14.1 due to a parsing bug

• Add guard for bdt==0 Fix bad merge for bdt with GEOS_Wrapper

• Remove unused code

• Fix theroritical timings

• Fixed a bug where pkz was being calculated twice, and the second calc was wrong

• Downgrade DaCe to 0.14.0 pending array aliasing fix

• Set default cache path for orchestrated DaCe to respect GT_CACHE_* env

• Remove previous per stencil override of default_build_folder

• Revert "Set default cache path for orchestrated DaCe to respect GT_CACHE_* env"

• Revert "Remove previous per stencil override of default_build_folder"

• Read cache_root in default dace backend

• Document faulty behavior with GT_CACHE_DIR_NAME

• Fix bad requirements syntax

• Check for the string value of CONST_VERSION directly instead of enum

• Protect constant selection more rigorusly. Clean abort on unknown constant given

• Log constants selection

• Refactor NQ to constants.py

• Fix or explain inlined import

• Verbose runtime error when bad dt_atmos

• Verbose warm up

• re-initialize heat_source and diss_est each call, add do_skeb check to accumulation

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• [NOAA:Update] Bring back Devops/GitHub actions on #15 & doubly periodic domain ([NOAA:Update] Bring back #15 & doubly periodic domain #25)

• Feature/dp driver (Feature/logger #13)

• initial commit

• adding test config

• adding the rest of driver and util code

• updating history.md

• move u_max to dycore config

• uncomment assert

• added comment explaining the copy of grid type to dycore config

• Turn main unit test & lint on PR, logger clean up [NASA:Update] (Devops/GitHub actions on #15)

• Initialize GeosDycoreWrapper with bdt (timestep)

• Use GEOS version of constants

• 1. Add qcld to the list of tracers beings advected

2. Made GEOS specific changes to thresholds in saturation adjustment

• Accumulate diss_est

• Allow GEOS_WRAPPER to process device data

• Add clear to collector for 3rd party use. GEOS pass down timings to caller

• Make kernel analysis run a copy stencil to compute local bandwith Parametrize tool with backend, output format

• Move constant on a env var Add saturation adjustement threshold to const

• Restrict dace to 0.14.1 due to a parsing bug

• Add guard for bdt==0

• Fix theroritical timings

• Fixed a bug where pkz was being calculated twice, and the second calc was wrong

• Downgrade DaCe to 0.14.0 pending array aliasing fix

• Set default cache path for orchestrated DaCe to respect GT_CACHE_* env

• Remove previous per stencil override of default_build_folder

• Revert "Set default cache path for orchestrated DaCe to respect GT_CACHE_* env"

• Read cache_root in default dace backend

• Document faulty behavior with GT_CACHE_DIR_NAME

• Check for the string value of CONST_VERSION directly instead of enum

• Protect constant selection more rigorusly. Clean abort on unknown constant given

• Log constants selection

• Refactor NQ to constants.py

• Introduce PACE_LOGLEVEL to control log level from outside

• Code guidelines clean up

• Devops/GitHub actions on (Devops/GitHub actions on #15)

• Linting on PR

• Run main unit test

• Update python to available 3.8.12

• Fix unit tests (remove dxa, dya rely on halo ex)

• Update HISTORY.md

• Adapt log_level in driver.run

• Verbose the PACE_CONSTANTS

• Doc log level hierarchical nature

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• Lint

---

• Update gt4py, dace, cleanup (Update gt4py, dace, cleanup #19)

• Update gt4py to top of master on June 21

• Update DaCe to 0.14.2 Workaround aliasing issue in FiniteVolumeTransport

• Fix to gt4py storage

• Downgrade to dace 0.14.1

• DaCe to 0.14.4 Orchestrating NonHydrostaticPressureGradient
  Adptating code to newer gt4py

• Regenerate constraints.txt

• Default constants to GFS Fix snapshot for GPU runs
  Lint on ETA
  Fix log level

• Remove daint_venv submodule

• Adding dace as a submodule Removing buildenv as a submodule

• Update gt4py to latest master

• Skip ConstantPropagation during Simplify

• Remove buidlenv

• Update requirements_dev.txt

• Add editable util to requirements_dev.txt

• lint

• scipy for tests is now needed

• Pin DaCe to pace-fixes-0 merge

• Remove logging setup in test_translate

• Make cupy import robust to device not being available

• Fix to GEOS bridge MPS detection

• Up gt4py to August 14th EOD:

  • Hip/ROCm
  • New allocators

• DaCE module: swap SSH for HTTPS (DaCe module: swap SSH for HTTPS #26)

• GEOS GridTools stencils build override (GEOS GridTools stencils build override #27)

• Stencil build override for GEOS

• Deactivate warnings if PACE_LOGLEVEL is > WARNING

• Better log level

• Bad merge (again)