Print methods

[gowerc]

Partially addresses #197

As a slightly annoying aside apparently print.<class> does not work for S4 objects so I had to break with the S3 method convention and define a show method in order for it to work.

[gowerc]

Removing reviewer request and converting back to draft, the other print methods are highly dependent on the parameters so will do them together

[github-actions]

Code Coverage Summary

Filename                       Stmts    Miss  Cover    Missing
---------------------------  -------  ------  -------  ----------------------
R/DataJoint.R                     56       0  100.00%
R/DataLongitudinal.R             100       1  99.00%   245
R/DataSubject.R                   52       1  98.08%   123
R/DataSurvival.R                  55       1  98.18%   145
R/defaults.R                      13       7  46.15%   27, 45-84, 111
R/generics.R                      15       1  93.33%   69
R/JointModel.R                    91       8  91.21%   113-125, 204, 210, 216
R/JointModelSamples.R             23       0  100.00%
R/Link.R                          18       0  100.00%
R/LinkGSF.R                       69      13  81.16%   116-128
R/LinkNone.R                       5       1  80.00%   36
R/LinkRandomSlope.R               11       0  100.00%
R/LongitudinalGSF.R               24       0  100.00%
R/LongitudinalModel.R             17       0  100.00%
R/LongitudinalQuantities.R        71       8  88.73%   89-96
R/LongitudinalRandomSlope.R       22       0  100.00%
R/Parameter.R                     14       0  100.00%
R/ParameterList.R                 37       1  97.30%   175
R/Prior.R                        117       0  100.00%
R/Quantities.R                    89       0  100.00%
R/simulations_gsf.R               43       0  100.00%
R/simulations_os.R                11       5  54.55%   35-39
R/simulations_rs.R                21       0  100.00%
R/simulations.R                   99       1  98.99%   122
R/StanModel.R                     14       0  100.00%
R/StanModule.R                   145       5  96.55%   197-198, 215, 252, 263
R/SurvivalExponential.R           10       0  100.00%
R/SurvivalLoglogistic.R           11       0  100.00%
R/SurvivalModel.R                 19       0  100.00%
R/SurvivalQuantities.R           103       6  94.17%   161-166
R/SurvivalWeibullPH.R             11       0  100.00%
R/utilities.R                    145       1  99.31%   13
R/zzz.R                           11      11  0.00%    4-29
TOTAL                           1542      71  95.40%

Diff against main

Filename                       Stmts    Miss  Cover
---------------------------  -------  ------  --------
R/generics.R                      +1       0  +0.48%
R/JointModel.R                   +29      +3  -0.73%
R/Link.R                         +12       0  +100.00%
R/LinkGSF.R                       +6      +1  +0.21%
R/LinkNone.R                      +2       0  +13.33%
R/LinkRandomSlope.R               +1       0  +100.00%
R/LongitudinalGSF.R               +1       0  +100.00%
R/LongitudinalModel.R             +7       0  +100.00%
R/LongitudinalRandomSlope.R       +1       0  +100.00%
R/Parameter.R                     +4       0  +100.00%
R/ParameterList.R                 +9      +1  -2.70%
R/Prior.R                        +17     -20  +20.00%
R/StanModel.R                     +8       0  +100.00%
R/SurvivalExponential.R           +1       0  +100.00%
R/SurvivalLoglogistic.R           +1     -10  +100.00%
R/SurvivalModel.R                 +7       0  +100.00%
R/SurvivalWeibullPH.R             +1       0  +100.00%
TOTAL                           +108     -25  +2.09%

Results for commit: c5a2eeb

Minimum allowed coverage is 80%

♻️ This comment has been updated with latest results

[github-actions]

Unit Tests Summary

    1 files    31 suites   6m 44s ⏱️
  76 tests   61 ✔️ 15 💤 0 ❌
292 runs  277 ✔️ 15 💤 0 ❌

Results for commit c5a2eeb.

♻️ This comment has been updated with latest results.

[gowerc]

Ok @danielinteractive this should be ready for review now. Due to their interconnected nature this implements the print methods for

• StanModel
• SurvivalModel
• SurvivalExponential
• SurvivalLogLogistic
• SurvivalWeibullPH
• LongitudinalModel
• LongitudinalGSF
• LongitudinalRandomSlope
• Link
• LinkGSF
• LinkLongitudinal
• Parameter
• Prior
• ParameterList

I would recommend reviewing this by just reviewing the _snaps/*.md files which outline clearly what is displayed when each of these objects is printed.

[danielinteractive]

Looks great, thanks @gowerc ! Great work