Added GridEven and GridManual

[gowerc]

Closes #302

Added GridManual to allow for very fine tuned control and then GridEven which directly addresses #302 . These should help improve the UI when generating the required quantity plots.

EDIT

Sorry as a minor aside I rename pt_to_ind to subject_to_index to both be consistent and more expressive

[github-actions]

Code Coverage Summary

Filename                          Stmts    Miss  Cover    Missing
------------------------------  -------  ------  -------  --------------------------------
R/brier_score.R                     166       0  100.00%
R/DataJoint.R                        76       2  97.37%   264, 270
R/DataLongitudinal.R                119       1  99.16%   244
R/DataSubject.R                      69       1  98.55%   124
R/DataSurvival.R                     77       0  100.00%
R/defaults.R                         10       6  40.00%   18-57, 84
R/generics.R                         25       1  96.00%   51
R/Grid.R                             30       0  100.00%
R/GridEven.R                         32       0  100.00%
R/GridFixed.R                        24       0  100.00%
R/GridGrouped.R                      46       0  100.00%
R/GridManual.R                       23       3  86.96%   78-80
R/GridObserved.R                     20       0  100.00%
R/JointModel.R                      122       8  93.44%   142-144, 194, 198, 240, 286, 292
R/JointModelSamples.R                65       0  100.00%
R/Link.R                             55       4  92.73%   159-162
R/LinkComponent.R                    47       5  89.36%   100, 118, 132-149
R/LongitudinalGSF.R                  64       0  100.00%
R/LongitudinalModel.R                37      12  67.57%   70-85
R/LongitudinalQuantities.R           61       0  100.00%
R/LongitudinalRandomSlope.R          27       0  100.00%
R/LongitudinalSteinFojo.R            57       8  85.96%   113-135
R/Parameter.R                        14       0  100.00%
R/ParameterList.R                    42       1  97.62%   184
R/Prior.R                           236       8  96.61%   480, 576, 588-606
R/Quantities.R                       60       0  100.00%
R/settings.R                         12      12  0.00%    55-69
R/SimGroup.R                          5       0  100.00%
R/SimJointData.R                     72       1  98.61%   103
R/SimLongitudinal.R                   5       2  60.00%   22, 40
R/SimLongitudinalGSF.R               51       0  100.00%
R/SimLongitudinalRandomSlope.R       42       0  100.00%
R/SimLongitudinalSteinFojo.R         48       0  100.00%
R/SimSurvival.R                     104       0  100.00%
R/StanModel.R                        15       0  100.00%
R/StanModule.R                      179       6  96.65%   199-200, 242, 253, 390, 418
R/SurvivalExponential.R              10       0  100.00%
R/SurvivalLoglogistic.R              11       0  100.00%
R/SurvivalModel.R                    19       0  100.00%
R/SurvivalQuantities.R              160       1  99.38%   120
R/SurvivalWeibullPH.R                11       0  100.00%
R/utilities.R                       146       1  99.32%   13
R/zzz.R                              28      25  10.71%   3, 8-12, 14-35, 47
TOTAL                              2522     108  95.72%

Diff against main

Filename            Stmts    Miss  Cover
----------------  -------  ------  --------
R/Grid.R              +20       0  +100.00%
R/GridEven.R          +32       0  +100.00%
R/GridFixed.R         -16       0  +100.00%
R/GridManual.R        +23      +3  +86.96%
R/GridObserved.R      -16      -3  +8.33%
TOTAL                 +43       0  +0.07%

Results for commit: 18684dc

Minimum allowed coverage is 80%

♻️ This comment has been updated with latest results

[github-actions]

Unit Tests Summary

  1 files   41 suites   7m 28s ⏱️
123 tests  92 ✅ 31 💤 0 ❌
866 runs  835 ✅ 31 💤 0 ❌

Results for commit d7ebf0a.

[github-actions]

Unit Test Performance Difference

Test Suite	$Status$	Time on main	$±Time$	$±Tests$	$±Skipped$	$±Failures$	$±Errors$
Grid	💚	$106.24$	$-4.64$	$+9$	$0$	$0$	$0$
JointModelSamples	💚	$35.69$	$-2.56$	$0$	$0$	$0$	$0$
LongitudinalQuantiles	💚	$42.17$	$-2.04$	$0$	$0$	$0$	$0$
model_multi_chain	💚	$44.52$	$-1.64$	$0$	$0$	$0$	$0$
stan_functions	💚	$48.81$	$-1.86$	$0$	$0$	$0$	$0$

Additional test case details

Test Suite	$Status$	Time on main	$±Time$	Test Case
Grid	💚	$106.05$	$-4.72$	GridObservered_Constructs_correct_quantities
Grid	👶		$+0.03$	subjects_to_list_works_as_expected
JointModelSamples	💚	$35.69$	$-2.56$	print_works_as_expected_for_JointModelSamples
LongitudinalQuantiles	💚	$34.88$	$-2.00$	Test_that_LongitudinalQuantities_works_as_expected
model_multi_chain	💚	$44.52$	$-1.64$	Can_recover_known_distribution_parameters_from_random_slope_model_when_using_multiple_chains

Results for commit 67ca860

♻️ This comment has been updated with latest results.

[danielinteractive]

Thanks @gowerc , looks good, see one suggestion below