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First developments on independent GUI widgets
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@nabealhasnawi
nabealhasnawi committed Feb 25, 2020
1 parent b926ed9 commit 922c349
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Showing 18 changed files with 8,429 additions and 10 deletions.
447 changes: 447 additions & 0 deletions IO/exportGUI_alsKlasse.m
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318 changes: 318 additions & 0 deletions IO/importGUI_alsKlasse.m
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Original file line number Diff line number Diff line change
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classdef importGUI_alsKlasse

properties
guiHandle
end

methods
function this = importGUI_alsKlasse()

this.guiHandle = this.createLayout();

% assign guidata like in guide
handles = guihandles(this.guiHandle);
guidata(this.guiHandle,handles);

this.initialize();
end

function guiHandle = createLayout(this)

h1 = figure(...
'PaperUnits','inches',...
'MenuBar','none',...
'Units','characters',...
'Position',[135.8 56.7692307692308 89.2 18.3846153846154],...
'Color',[0.5 0.5 0.5],...
'Name','Import Patient',...
'HandleVisibility','callback',...
'Tag','figure_importDialog',...
'WindowStyle','normal',...
'PaperSize',[8.5 11],...
'PaperType','usletter');

guiHandle = h1;

h2 = uicontrol(...
'Parent',h1,...
'Units','normalized',...
'String','Patient CT file [HU]:',...
'BackgroundColor', [0.5 0.5 0.5],...
'HorizontalAlignment','left',...
'Style','text',...
'Position',[0.03 0.85 0.4 0.1],...
'Tag','text2');


h3 = uicontrol(...
'Parent',h1,...
'Units','normalized',...
'Style','edit',...
'Position',[0.03 0.78 0.73 0.1],...
'BackgroundColor',[1 1 1],...
'Callback',@(hObject,eventdata)this.edit_ctPath_Callback(hObject,eventdata,guidata(hObject)),...
'Tag','edit_ctPath');


h4 = uicontrol(...
'Parent',h1,...
'Units','normalized',...
'String','Browse...',...
'BackgroundColor', [0.5 0.5 0.5],...
'Position',[0.78 0.78 0.2 0.1],...
'Callback',@(hObject,eventdata)this.pushbutton_ctPath_Callback(hObject,eventdata,guidata(hObject)),...
'Tag','pushbutton_ctPath');


h5 = uicontrol(...
'Parent',h1,...
'Units','normalized',...
'String','Binary Masks/Segmentations',...
'HorizontalAlignment','left',...
'BackgroundColor', [0.5 0.5 0.5],...
'Style','text',...
'Position',[0.03 0.435 0.5 0.1],...
'Tag','text_masks');


h6 = uicontrol(...
'Parent',h1,...
'Units','normalized',...
'Max',2,...
'Style','listbox',...
'Position',[0.03 0.15 0.73 0.32],... [1.8 3.38461538461539 66.2 4.69230769230769],...
'BackgroundColor',[1 1 1],...
'Callback',@(hObject,eventdata)this.listbox_maskPaths_Callback(hObject,eventdata,guidata(hObject)),...
'Tag','listbox_maskPaths',...
'KeyPressFcn',@(hObject,eventdata)matRad_importGUI('listbox_maskPaths_KeyPressFcn',hObject,eventdata,guidata(hObject)));


h7 = uicontrol(...
'Parent',h1,...
'Units','normalized',...
'String','Add File(s)...',...
'Style',get(0,'defaultuicontrolStyle'),...
'BackgroundColor', [0.5 0.5 0.5],...
'Position',[0.78 0.37 0.2 0.1],...
'Callback',@(hObject,eventdata)this.pushbutton_addMaskPaths_Callback(hObject,eventdata,guidata(hObject)),...
'Tag','pushbutton_addMaskPaths');


h8 = uicontrol(...
'Parent',h1,...
'Units','normalized',...
'String','Import',...
'BackgroundColor', [0.5 0.5 0.5],...
'Position',[0.55 0.02 0.2 0.1],...
'Callback',@(hObject,eventdata)this.pushbutton_import_Callback(hObject,eventdata,guidata(hObject)),...
'Tag','pushbutton_import');


h9 = uicontrol(...
'Parent',h1,...
'Units','normalized',...
'String','Cancel',...
'BackgroundColor', [0.5 0.5 0.5],...
'Callback',@(hObject,eventdata)this.pushbutton_cancel_Callback(hObject,eventdata,guidatahObject),...
'Position',[0.78 0.02 0.2 0.1],...
'Tag','pushbutton_cancel');


h10 = uicontrol(...
'Parent',h1,...
'Units','normalized',...
'String','Add Folder...',...
'BackgroundColor', [0.5 0.5 0.5],...
'Position',[0.78 0.22 0.2 0.1],...
'Callback',@(hObject,eventdata)this.pushbutton_addMaskFolders_Callback(hObject,eventdata,guidata(hObject)),...
'Tag','pushbutton_addMaskFolders');


h11 = uicontrol(...
'Parent',h1,...
'Units','normalized',...
'String','Convert from HU?',...
'BackgroundColor', [0.5 0.5 0.5],...
'Style','checkbox',...
'Position',[0.03 0.68 0.4 0.1],...
'Callback',@(hObject, eventdata)this.checkbox_huConvert_Callback(hObject,eventdata,guidata(hObject)),...
'Tooltip','If this is checked, the import assumes that this is a CT given in HU and will convert with the given (or the default) HLUT',...
'TooltipString','If this is checked, the import assumes that this is a CT given in HU and will convert with the given (or the default) HLUT',...
'Tag','checkbox_huConvert');


h12 = uicontrol(...
'Parent',h1,...
'Units','normalized',...
'String','matRad_default.hlut',...
'HorizontalAlignment','left',...
'Style','edit',...
'Position',[0.03 0.57 0.73 0.1],...
'BackgroundColor',[1 1 1],...
'Callback',@(hObject,eventdata)this.edit_hlut_Callback(hObject,eventdata,guidata(hObject)),...
'Tag','edit_hlut');


h13 = uicontrol(...
'Parent',h1,...
'Units','normalized',...
'String','HLUT file...',...
'BackgroundColor', [0.5 0.5 0.5],...
'Position',[0.78 0.57 0.2 0.1],... [69.8 10.6923076923077 18.2 1.76923076923077],...
'Callback',@(hObject,eventdata)this.pushbutton_hlutFile_Callback(hObject,eventdata,guidata(hObject)),...
'Tag','pushbutton_hlutFile');
end

%OPENING/INITIALIZE FUNKTION
function this = initialize(this)
handles = guidata(this.guiHandle); % READ FROM GUIDATA
handles.output = this.guiHandle;
guidata(this.guiHandle, handles);
end

%OUTPUT FUNKTION
function varargout = OutputFcn(hObject, eventdata, handles)
varargout{1} = handles.output;
end

%CALLBACK FOR H3 EDIT CREATE PATH
function this = edit_ctPath_Callback(this, hObject, event,handles)
varargout{1} = handles.output;

end

%CALLBACK FOR H4 PUSHBUTTON CREATE PATH
function this = pushbutton_ctPath_Callback(this, hObject, event, handles)
[importCTFile,importCTPath,~] = uigetfile({'*.nrrd', 'NRRD-Files'}, 'Choose the CT file...');

if importCTFile ~= 0
set(handles.edit_ctPath,'String',fullfile(importCTPath,importCTFile)); % NON EXISTING FIELD 'edit_ctPath'
% Update handles structure
guidata(hObject, handles);
end
end

%CALLBACK FOR H6 LISTBOX MASK PATHS
function this = listbox_maskPaths_Callback(this, hObject, event, handles)

end

%CALLBACK FOR H7 PUSHBUTTON ADD MASKPATHS
function this = pushbutton_addMaskPaths_Callback(this, hObject, event, handles)
[importMaskFile,importMaskPath,~] = uigetfile({'*.nrrd', 'NRRD-Files'}, 'Choose the binary mask files...','MultiSelect','on');
if ~isempty(importMaskFile)
if ~iscell(importMaskFile)
tmpName = importMaskFile;
importMaskFile = cell(1);
importMaskFile{1} = tmpName;
end
importMaskFile = cellfun(@(filename) fullfile(importMaskPath,filename),importMaskFile,'UniformOutput',false);
entries = get(handles.listbox_maskPaths,'String');
newEntries = [entries importMaskFile];
set(handles.listbox_maskPaths,'String',newEntries);
% Update handles structure
guidata(hObject, handles);
end
end

function cst = showCheckDialog(this,cst)

handle = dialog('Position', [100 100 400 250],'WindowStyle','modal','Name','Confirm Segmentations');

%Create Table
hTable = uitable('Parent',handle,'Units','normal','Position',[0.1 0.2 0.8 0.8]);
set(hTable,'Data',cst(:,2:3));
set(hTable,'ColumnName',{'Name','Type'});
set(hTable,'ColumnWidth',{150,'auto'});
set(hTable,'RowName',char([]));
set(hTable,'ColumnEditable',[true true]);
set(hTable,'ColumnFormat',{'char',{'TARGET', 'OAR', 'IGNORED'}});

%Create Button
hButton = uicontrol(handle,'Style','pushbutton','String','Confirm','Units','normal','Position',[0.7 0.05 0.2 0.1],'Callback','uiresume(gcbf)');%{@pushbutton_confirm_vois_callback});
try
uiwait(handle);
tmp = get(hTable,'Data');
cst(:,2:3) = tmp(:,:);
catch
warning('Closed checkdialog without confirmation! Using default cst information!');
end
delete(handle);
end

%CALLBACK FOR H8 PUSHBUTTON IMPORT
function this = pushbutton_import_Callback(this, hObject, event, handles)
ctFile = get(handles.edit_ctPath,'String');
maskFiles = get(handles.listbox_maskPaths,'String');

if isempty(ctFile) || isempty(maskFiles)
errordlg('Please sepecify a CT and at least one mask!');
end

convertHU = get(handles.checkbox_huConvert,'Value');

if convertHU
[ct,cst] = matRad_importPatient(ctFile,maskFiles,get(handles.edit_hlut,'String'));
else
[ct,cst] = matRad_importPatient(ctFile,maskFiles);
end

cst = this.showCheckDialog(cst);

assignin('base', 'ct', ct);
assignin('base', 'cst', cst);

delete(handles.figure_importDialog);
end

%CALLBACK FOR H9 PUSHBUTTON CANCEL
function this = pushbutton_cancel_Callback(this, hObject, event, handles)
delete(handles.figure_importDialog);
end

%CALLBACK FOR H10 PUSHBUTTON ADD MASK FOLDERS
function this = pushbutton_addMaskFolders_Callback(this, hObject, event, handles)
importMaskPath = uigetdir('./', 'Choose the folder containing binary mask files...');
importMaskPath = [importMaskPath filesep];
if ~isempty(importMaskPath)
entries = get(handles.listbox_maskPaths,'String');
newEntries = [entries cellstr(importMaskPath)];
set(handles.listbox_maskPaths,'String',newEntries);
% Update handles structure
guidata(hObject, handles);
end
end

%CALLBACK FOR H11 CHECKBOX HU CONVERT
function this = checkbox_huConvert_Callback(this, hObject, event, handles)
checked = get(hObject,'Value');

if checked
fieldState = 'on';
else
fieldState = 'off';
end

set(handles.edit_hlut,'Enable',fieldState);
set(handles.pushbutton_hlutFile,'Enable',fieldState);
end

%CALLBACK FOR H12 EDIT HLUT
function this = edit_hlut_Callback(this, hObject, event, handles)
%bleibt leer
end

%CALLBACK FOR H13 PUSHBUTTON HLUT FILE
function this = pushbutton_hlutFile_Callback(this, hObject, event, handles)
[importHLUTFile,importHLUTPath,~] = uigetfile({'*.hlut', 'matRad HLUT-Files'}, 'Choose the HLUT file...');
if importHLUTFile ~= 0
set(handles.edit_hlut,'String',fullfile(importHLUTPath,importHLUTFile));
% Update handles structure
guidata(hObject, handles);
end
end


end
end

44 changes: 43 additions & 1 deletion IO/matRad_Widget.m
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Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,10 @@
handles = []; %Holds all handles in parent handle
end

events
workspaceChanged
end

methods
%CONSTRUCTOR
function this = matRad_Widget(handleParent)
Expand All @@ -18,9 +22,47 @@
end

%INITIALIZE FUNCTION
function this = initialize(this)
function this = initialize(this)
end

function this = update(this)
end

%{
function this = disable(this)
end
function this = enable(this)
end
%}

function showWarning(this,Message,ME)
handles = this.handles;
if nargin == 3
%Add exception message
if isfield(handles,'devMode') && handles.devMode
meType = 'extended';
else
meType = 'basic';
end
Message = {Message,ME.message};%{Message,ME.getReport(meType,'hyperlinks','off')};
end

if isfield(handles,'ErrorDlg')
if ishandle(handles.ErrorDlg)
close(handles.ErrorDlg);
end
end
handles.ErrorDlg = errordlg(Message);

this.handles = handles;
end

end

%methods (Abstract)
% this = initialize(this);
%end

methods (Access = protected)

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