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Implement dpnp.cov() though existing dpnp methods #1396

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merged 8 commits into from
Jun 15, 2023

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@antonwolfy antonwolfy commented May 11, 2023

The PR proposes to rewrite current implementation of dpnp.cov.
The idea is to estimate covariance matrix through existing dpnp and dpctl methods which are assumed to be improved and which have to demonstrate a better performance, rather than using OneDPL functions like in current implementation of dpnp_cov from the backend.

The PR is issued by #1398 .

  • Have you provided a meaningful PR description?
  • Have you added a test, reproducer or referred to issue with a reproducer?
  • Have you tested your changes locally for CPU and GPU devices?
  • Have you made sure that new changes do not introduce compiler warnings?
  • Have you checked performance impact of proposed changes?
  • If this PR is a work in progress, are you filing the PR as a draft?

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@antonwolfy antonwolfy marked this pull request as ready for review June 14, 2023 21:07
@antonwolfy antonwolfy merged commit f5e6425 into IntelPython:master Jun 15, 2023
@antonwolfy antonwolfy deleted the rewrite_dpnp_cov branch June 15, 2023 07:21
antonwolfy added a commit that referenced this pull request Jun 15, 2023
* Add a copy for strided arrays in dpnp.dot()

* update versions

* Rework transpose methods to use dpctl.tensor functions (#1389)

* Rework transpose methods to call dpctl.tensor functions

* Applied review comments & added more tests

* Obtain a proper result type on device without fp64 (#1429)

* Obtain a proper result type on device without fp64

* remove excess defenitions

* Reuse dpctl.tensor.reshape (#1391)

* Rework transpose methods to call dpctl.tensor functions

* Reuse dpctl.tensor.reshape

* added dpnp.shape() and unmuted more tests

* fixed compiling issue & unmuted reshaper tests with order param

* Resolve merge issues

* resolve type mismatch on Win

* Use MCG59 engine on GPU device (#1423)

* Use MCG59 engine on GPU device

* Fix issue for Windows

* reduce precision in tests

* move w/a before import dpctl

* Reuse add(), multiply() and subtract() from dpctl (#1430)

* Reuse add(), multiply() and subtract() from dpctl

* add in-place support

* Reuse dpctl.tensor.sum for dpnp.sum (#1426)

* Reuse dpctl.tensor.sun for dpnp.sum

* Update tests for dpnp.sum

* Fix remarks

* Update tests/third_party/cupy/testing/helper.py

---------

Co-authored-by: Anton <[email protected]>

* Workaround to Klocwork (#1433)

* Add inplace support of divide (#1434)

* Add dpnp.result_type() support (#1435)

* Add dpnp.result_type() support

* Update dpnp/dpnp_iface_manipulation.py

Co-authored-by: Natalia Polina <[email protected]>

---------

Co-authored-by: Natalia Polina <[email protected]>

* Implementation of dpnp.mean() (#1431)

* Reuse dpctl.tensor.sun for dpnp.sum

* Update tests for dpnp.sum

* Fix remarks

* Implementation of dpnp.mean

* Update logic for dpnp.mean function

* add normalize_axis_tuple

* Additional tests for dpnp.mean

* Fix minor remarks

* Add inplace support of divide

* Use inplace divide only for dpnp.inexact types

* Update tests for dpnp.mean

* Skip test_sample.py::TestRandint2::test_bound_float1

* Remove unused import

* Update dtype check

* Update dpnp/dpnp_iface_statistics.py

* Return deleted skips

---------

Co-authored-by: Anton Volkov <[email protected]>
Co-authored-by: Anton <[email protected]>

* New implementation of dpnp.outer (#1436)

* Add a new implementation of dpnp.outer

* Update dpnp.outer implementation

---------

Co-authored-by: Anton <[email protected]>

* Set dpnp dependency on dpctl>=0.14.3 (#1437)

* Implement dpnp.cov() though existing dpnp methods (#1396)

* Implement dpnp.cov() though existing dpnp methods

* Applied review comments

* Clean up the code to get rid of todo

* use dpnp.mean()

* Added ChangeLog.md (#1439)

* Added ChangeLog.md

* exclude PR for comprasion ops

* Update version to 0.12.0 (#1440)

---------

Co-authored-by: vlad-perevezentsev <[email protected]>
Co-authored-by: Natalia Polina <[email protected]>
antonwolfy added a commit that referenced this pull request Jun 15, 2023
* Implement dpnp.cov() though existing dpnp methods

* Applied review comments

* Clean up the code to get rid of todo

* use dpnp.mean()
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