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Diffusion tutorial for isotropic diffusion #489

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merged 11 commits into from
Sep 30, 2024

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@tinorodriguez tinorodriguez commented Sep 27, 2024

In this diffusion tutorial, two phantoms made with a single voxel with different diffusivity patters are tested, using a pulse gradient spin echo (PGSE) sequence varying the placement of the diffusion-encoding gradients used, as well as the b-value. There are plots of everything made throughout the entire tutorial, showing the way spins are diffused, the shape of the sequences and the amount of attenuation of the signal made by the diffusion phenomenon.

https://juliahealth.org/KomaMRI.jl/previews/PR489/

@tinorodriguez tinorodriguez marked this pull request as ready for review September 27, 2024 15:30
@cncastillo cncastillo added the documentation Improvements to docs., it also triggers doc preview label Sep 27, 2024
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codecov bot commented Sep 27, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 86.72%. Comparing base (ab78766) to head (46e3673).
Report is 18 commits behind head on master.

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@@            Coverage Diff             @@
##           master     #489      +/-   ##
==========================================
- Coverage   90.77%   86.72%   -4.05%     
==========================================
  Files          54       54              
  Lines        3002     2998       -4     
==========================================
- Hits         2725     2600     -125     
- Misses        277      398     +121     
Flag Coverage Δ
base 87.07% <ø> (ø)
core 72.95% <ø> (-20.25%) ⬇️
files 91.69% <ø> (ø)
komamri 93.98% <ø> (ø)
plots 92.95% <ø> (ø)

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see 9 files with indirect coverage changes

@cncastillo cncastillo changed the title Diffusion tutorial with two diffusivity patterns. Diffusion tutorial for isotropic diffusion Sep 30, 2024
@cncastillo cncastillo merged commit 16cc122 into JuliaHealth:master Sep 30, 2024
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