[TopOpt_in_PETSc] WIP: new builder

T/TopOpt_in_PETSc/build_tarballs.jl

@@ -0,0 +1,46 @@
+# Note that this script can accept some limited command-line arguments, run
+# `julia build_tarballs.jl --help` to see a usage message.
+using BinaryBuilder, Pkg
+
+name = "TopOpt_in_PETSc"
+version = v"0.1"
+
+# Collection of sources required to complete build
+sources = [
+    GitSource("https://github.com/topopt/TopOpt_in_PETSc", "26eecbf3b1d0135956e0364d77c30e43e9bc3db2"),
+    DirectorySource("./bundled"),
+]
+
+# Bash recipe for building across all platforms
+# New makefiles added, the patches fix some weird include issues mostly.
+# There is likely a better way to fix them, or upstream the fixes.
+script = raw"""
+
+cd TopOpt_in_PETSc
+cp ../Makefile Makefile
+make libtopopt
+make topopt
+cp topopt ${bindir}/topopt
+cp libtopopt.$dlext ${libdir}/libtopopt.$dlext
+install_license ${WORKSPACE}/srcdir/TopOpt_in_PETSc/lesser.txt
+"""
+
+# These are the platforms we will build for by default, unless further
+# platforms are passed in on the command line
+platforms = expand_cxxstring_abis(expand_gfortran_versions(supported_platforms(exclude=[Platform("i686", "windows")])))
+
+
+# The products that we will ensure are always built
+products = [
+    LibraryProduct("libtopopt", :libtopopt),
+    ExecutableProduct("topopt", :topopt)
+]
+
+# Dependencies that must be installed before this package can be built
+dependencies = [
+    Dependency("PETSc_jll", v"3.16.5"; compat="3.16.5"),
+    Dependency(PackageSpec(name="CompilerSupportLibraries_jll", uuid="e66e0078-7015-5450-92f7-15fbd957f2ae"))
+]
+
+# Build the tarballs, and possibly a `build.jl` as well.
+build_tarballs(ARGS, name, version, sources, script, platforms, products, dependencies; julia_compat="1.6", preferred_gcc_version=v"9")

T/TopOpt_in_PETSc/bundled/Makefile

@@ -0,0 +1,14 @@
+PETSC_DIR=$(prefix)/lib/petsc/double_real_Int32
+PETSC_ARCH=x86_64-linux-gnu_double_real_Int32
+CXXFLAGS = -fPIC
+CPPFLAGS=-I. -I$(includedir) -I$(PETSC_DIR)/include -I$(PETSC_DIR)/
+LDFLAGS= -Wl,-rpath,/workspace/destdir/lib/petsc/double_real_Int32/lib -L/workspace/destdir/lib/petsc/double_real_Int32/lib -Wl,-rpath,/workspace/destdir/lib -L/workspace/destdir/lib -Wl,-rpath,/opt/x86_64-linux-gnu/x86_64-linux-gnu/lib64 -L/opt/x86_64-linux-gnu/x86_64-linux-gnu/lib64 -Wl,-rpath,/opt/x86_64-linux-gnu/lib/gcc/x86_64-linux-gnu/9.1.0 -L/opt/x86_64-linux-gnu/lib/gcc/x86_64-linux-gnu/9.1.0 -Wl,-rpath,/opt/x86_64-linux-gnu/lib/gcc -L/opt/x86_64-linux-gnu/lib/gcc -Wl,-rpath,/opt/x86_64-linux-gnu/x86_64-linux-gnu/sys-root/lib64 -L/opt/x86_64-linux-gnu/x86_64-linux-gnu/sys-root/lib64 -Wl,-rpath,/opt/x86_64-linux-gnu/x86_64-linux-gnu/sys-root/usr/lib64 -L/opt/x86_64-linux-gnu/x86_64-linux-gnu/sys-root/usr/lib64 -Wl,-rpath,/opt/x86_64-linux-gnu/x86_64-linux-gnu/lib -L/opt/x86_64-linux-gnu/x86_64-linux-gnu/lib -Wl,-rpath,/opt/x86_64-linux-gnu/x86_64-linux-gnu/sys-root/lib -L/opt/x86_64-linux-gnu/x86_64-linux-gnu/sys-root/lib -Wl,-rpath,/opt/x86_64-linux-gnu/x86_64-linux-gnu/sys-root/usr/lib -L/opt/x86_64-linux-gnu/x86_64-linux-gnu/sys-root/usr/lib
+LDLIBS= -lpetsc_double_real_Int32 -lopenblas -lpthread -lm -lmpifort -lmpi -lstdc++ -ldl -lgfortran -lm -lgfortran -lm -lgcc_s -lstdc++ -ldl
+topopt: main.o TopOpt.o LinearElasticity.o MMA.o Filter.o PDEFilter.o MPIIO.o
+	$(CC) $(CPPFLAGS) -v -o topopt main.o TopOpt.o LinearElasticity.o MMA.o Filter.o PDEFilter.o MPIIO.o $(LDFLAGS) $(LDLIBS)
+
+libtopopt: TopOpt.o LinearElasticity.o MMA.o Filter.o PDEFilter.o MPIIO.o
+	$(CC) $(CPPFLAGS) -v -shared -o libtopopt.$(dlext) TopOpt.o LinearElasticity.o MMA.o Filter.o PDEFilter.o MPIIO.o $(LDFLAGS) $(LDLIBS)
+
+myclean:
+	rm -rf topopt *.o output* binary* log* makevtu.pyc Restart* 

T/TopOpt_in_PETSc/bundled/patches/petsc_name_mangle.patch

@@ -0,0 +1,14 @@
+diff --git a/config/BuildSystem/config/packages/BlasLapack.py b/config/BuildSystem/config/packages/BlasLapack.py
+index bbae50c096..9ad0a994eb 100644
+--- a/config/BuildSystem/config/packages/BlasLapack.py
++++ b/config/BuildSystem/config/packages/BlasLapack.py
+@@ -121,7 +121,8 @@ class Configure(config.package.Package):
+     foundLapack = 0
+     self.f2c    = 0
+     # allow a user-specified suffix to be appended to BLAS/LAPACK symbols
+-    self.suffix = self.argDB.get('with-blaslapack-suffix', '')
++    # argDB return a list when with-blaslapack-suffix is used
++    self.suffix = self.argDB.get('with-blaslapack-suffix', '')[0]
+     mangleFunc = self.compilers.fortranMangling
+     self.logPrint('Checking for Fortran name mangling '+mangleFunc+' on BLAS/LAPACK')
+     foundBlas = self.checkBlas(blasLibrary, self.getOtherLibs(foundBlas, blasLibrary), mangleFunc,'dot')