tbtAMR implements TB-profiler and custom logic developed at MDU to identify mutations linked to AMR mechanisms in M. tuberculosis and generate reports suitable for public health in Victoria. It may also be suitable for use in research settings.
tbtAMR is now accredited to ISO15189 standard by NATA for use in Victoria Australia.
In order to install tbtAMR conda is strongly recommended - installation instructions can be found here.
conda create -n tbtamr tbtamr
See our wiki page for further information on tbtamr usage.