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MilkweedMod

Identifying Priority Survey Sites for Early-Season Milkweed Conservation

MilkweedMod capstone group hexsticker. Dark green background with a white outline of California, filled in with illustrated milkweed plants and an orange monarch butterfly accompanying the text Milkweed Mod

MEDS SBBG Milkweed Organization

Table of Contents

Project Description

Data

Technical Documentation

Disclaimers

Authors and Contributors

Client

Project Description

Monarch butterfly (Danaus plexippus) populations are experiencing decline due to habitat degradation and climate threats. In 2024, this iconic species became considered for protection under the Endangered Species Act. Critical to the persistence of this species of cultural and ecological importance is milkweed (Asclepias spp.), which monarchs rely on as an essential resource for food and reproduction. Motivated by concerns over the loss of monarch habitat, the Santa Barbara Botanic Garden (SBBG) and local collaborators are working to identify potential restoration areas in the Los Padres National Forest (LPNF). However, the vast size and complex terrain of the LPNF pose a logistical challenge to surveying. Therefore, there is a need for a tool to aid in selecting sites to prioritize. Our team created a priority index for surveying milkweed within the LPNF by predicting the habitat suitability for four early-season milkweed species using Maximum Entropy (MaxEnt) species distribution modeling and creating a novel survey site accessibility index. We identified high-priority sites for the team to survey based on high predicted suitability for each species of early-season milkweed and high physical accessibility. To communicate these results, we created an interactive web dashboard, which the SBBG team will use for field planning to support the ongoing monitoring of milkweed populations for monarch habitat restoration efforts within the LPNF.

milkweed_sp Photos courtesy of Kylie Etter

To achieve this goal we have identified the following objectives:

  1. Identify high-priority milkweed survey sites, based on habitat suitability and physical accessibility, throughout the Los Padres National Forest to direct Santa Barbara Botanic Garden summer 2024 field surveys.

  2. Deliver all components of objective 1 in the form of an interactive web dashboard to facilitate field survey planning and allow for future updates as additional data is collected.

Data Sources

Data Source Use
SBBG Milkweed Survey Locations (2023 Survey): milkweed species, presence/absence, location, number of plants (.shp) Dr. Sarah Cusser (SBBG) via Google Drive Habitat Suitability Map, Interactive Web Dashboard
Bioclim (19 variables): annual trends, seasonality, extreme/limiting environmental factors based on monthly temperature and rainfall data (.tif) WordClim via {wallace}’s envs_worldclim() function, which utilizes {raster}’s getData() function in R Habitat Suitability Map, Survey Site Priority Index, Interactive Web Dashboard
California Multi-Source Land Ownership: classification of public and private land in the LPNF and surrounding areas (.shp) California Department of Forestry and Fire Protection; California State Geoportal, hosted on CAL FIRE Portal (via gis.data.ca.gov) Survey Site Accessibility Index, Survey Site Priority Index
Canopy Cover: horizontal cover fraction occupied by tree canopies (.tif) California Forest Observatory, selecting “Canopy Cover” from available datasets to download Habitat Suitability Map, Survey Site Accessibility Index, Survey Site Priority Index, Interactive Web Dashboard
Digital Elevation Model (DEM): topographic surface of the earth and flattened water surfaces (.tif) USGS’s The National Map (TNM) download interface; Elevation Products (3DEP) 1 arc-second DEM Habitat Suitability Map, Survey Site Accessibility Index, Survey Site Priority Index, Interactive Web Dashboard
Los Padres National Forest (LPNF) Boundary: boundaries of the northern and southern regions of the LPNF (.gdb) California State Parks GIS Data (via parks.ca.gov) ESRI geodatabase Habitat Suitability Map, Survey Site Accessibility Index, Interactive Web Dashboard
LPNF 2023 Trails and Roads: trails and roads in the southern region of the LPNF (.shp) Los Padres Forest Watch via ArcGIS Survey Site Accessibility Index, Survey Site Priority Index, Interactive Web Dashboard
USGS 2024 Trails and Roads: trails and different types of roads in California (.shp), used data from within the northern region of the LPNF National Transportation Data (NTD) California Shapefile, courtesy of the U.S. Geological Survey Survey Site Accessibility Index, Survey Site Priority Index, Interactive Web Dashboard

Technical Documentation

To read more about the project and modeling processes, please refer to our Bren project page and technical documentation.

Disclaimers

Plant and seed collection on Forest Service land is not permissible without a plant collection permit from the Los Padres National Forest.

This project was completed as a part of the Master of Environmental Data Science program at the Bren School of Environmental Science & Management at the University of California, Santa Barbara.

Authors and Contributors

Client

Dr. Sarah Cusser, Terrestrial Invertebrate Conservation Ecologist

Santa Barbara Botanic Garden
1212 Mission Canyon Rd.
Santa Barbara, CA 93105

Popular repositories Loading

  1. milkweed-mod milkweed-mod Public

    Repository containing materials to do species distribution modeling and develop a survey site accessibility index for the Los Padres National Forest for surveying milkweed species by the Santa Barb…

    R 2 1

  2. milkweed-site-finder milkweed-site-finder Public

    Repository containing materials to build web dashboard that hosts information for surveying milkweed species in the Los Padres National Forest for the Santa Barbara Botanic Gardens

    R 1

  3. .github .github Public

Repositories

Showing 3 of 3 repositories
  • milkweed-mod Public

    Repository containing materials to do species distribution modeling and develop a survey site accessibility index for the Los Padres National Forest for surveying milkweed species by the Santa Barbara Botanic Gardens

    MEDS-SBBG-milkweed/milkweed-mod’s past year of commit activity
    R 2 MIT 1 4 0 Updated Jun 10, 2024
  • .github Public
    MEDS-SBBG-milkweed/.github’s past year of commit activity
    0 0 0 0 Updated Jun 10, 2024
  • milkweed-site-finder Public

    Repository containing materials to build web dashboard that hosts information for surveying milkweed species in the Los Padres National Forest for the Santa Barbara Botanic Gardens

    MEDS-SBBG-milkweed/milkweed-site-finder’s past year of commit activity
    R 1 MIT 0 0 0 Updated Jun 3, 2024

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