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Add Doxygen files for Dycore Documentation #10

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valbonakunkel-noaa
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@climbfuji
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Notes:

  1. The PR should be for branch ufs_public_release, not for dev/emc
  2. The PR is not based on the latest version of the code:
    • the documentation of the routine run_setup in model/fv3_control.F90 is not included
    • there are some actual code changes that need to be removed (model/fv3_control.F90, lines 595 to 605)

I pulled the code from https://github.com/valbonakunkel-noaa/GFDL_atmos_cubed_sphere, branch dev/emc, into the latest ufs_public_release and created a PR to replace this PR #10: #13

Can someone with sufficient privileges please close this PR #10? Thanks.

@junwang-noaa
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Code is committed to public release branch. close PR.

junwang-noaa pushed a commit that referenced this pull request Apr 17, 2020
- bugfix for GNU compiler
- reduce noise in stdout

Squashed commit of the following:

commit 86c127f
Merge: ce66d6a f9bbb4f
Author: Dom Heinzeller <[email protected]>
Date:   Fri Apr 10 11:32:21 2020 -0600

    Merge pull request #11 from climbfuji/update_dtc_develop_from_dev_emc_20200409

    Update dtc/develop from dev/emc 2020/04/09

commit f9bbb4f
Author: Dom Heinzeller <[email protected]>
Date:   Thu Apr 9 20:14:24 2020 -0600

    Bugfix for GNU compiler in model/fv_regional_bc.F90, reduce verbosity in driver/fvGFS/atmosphere.F90

commit ecca997
Merge: ce66d6a 80ce8ce
Author: Dom Heinzeller <[email protected]>
Date:   Thu Apr 9 09:38:48 2020 -0600

    Merge branch 'dev/emc' of https://github.com/NOAA-EMC/GFDL_atmos_cubed_sphere into HEAD

commit ce66d6a
Merge: 4279bf7 9bacf55
Author: Dom Heinzeller <[email protected]>
Date:   Fri Mar 13 13:00:41 2020 -0600

    Merge pull request #10 from climbfuji/update_from_dev_emc_20200312_and_other_changes

    Update from dev/emc 2020/03/12

commit 9bacf55
Merge: 4279bf7 371a29a
Author: Dom Heinzeller <[email protected]>
Date:   Thu Mar 12 10:33:44 2020 -0600

    Merge branch 'dev/emc' of https://github.com/NOAA-EMC/GFDL_atmos_cubed_sphere into HEAD

commit 4279bf7
Merge: 846f5a5 4858d33
Author: Dom Heinzeller <[email protected]>
Date:   Mon Mar 9 12:41:51 2020 -0600

    Merge pull request #9 from climbfuji/update_dtc_develop_from_emc

    Update dtc/develop from dev/emc 2020/03/04

commit 4858d33
Merge: 846f5a5 db3acfb
Author: Dom Heinzeller <[email protected]>
Date:   Fri Feb 28 08:46:55 2020 -0700

    Merge branch 'dev/emc' of https://github.com/NOAA-EMC/GFDL_atmos_cubed_sphere into HEAD

commit 846f5a5
Merge: 3a4dfd8 9a290ee
Author: Dom Heinzeller <[email protected]>
Date:   Mon Feb 3 07:43:08 2020 -0700

    Merge pull request #7 from climbfuji/update_dtc_develop_from_dev-emc

    dtc/develop: update from dev/emc 2020/01/27

commit 9a290ee
Merge: 3a4dfd8 a56907a
Author: Dom Heinzeller <[email protected]>
Date:   Mon Jan 27 09:28:57 2020 -0700

    Merge branch 'dev/emc' of https://github.com/noaa-emc/GFDL_atmos_cubed_sphere into HEAD

commit 3a4dfd8
Merge: 0c9ab9e 68576a6
Author: Dom Heinzeller <[email protected]>
Date:   Tue Dec 3 15:19:24 2019 -0700

    Merge pull request #6 from climbfuji/dtc_develop_udpate_from_emc_20191127

    dtc/develop: update from EMC 2019/11/27

commit 68576a6
Merge: 0c9ab9e 452333a
Author: Dom Heinzeller <[email protected]>
Date:   Wed Nov 27 14:13:08 2019 -0700

    Merge branch 'dev/emc' of https://github.com/NOAA-EMC/GFDL_atmos_cubed_sphere into HEAD

commit 0c9ab9e
Merge: 9871607 b280b37
Author: Dom Heinzeller <[email protected]>
Date:   Fri Nov 22 16:17:57 2019 -0700

    Merge pull request #5 from mzhangw/HAFS_fer_hires

    minimal changes to make nwat =4 compatible with Ferrier-Aligo MP scheme

commit b280b37
Author: Man.Zhang <[email protected]>
Date:   Tue Nov 19 14:53:57 2019 -0700

    bug fix

commit 98c58ad
Author: Man.Zhang <[email protected]>
Date:   Tue Nov 19 14:35:10 2019 -0700

    bug fix

commit 8805acd
Author: Man.Zhang <[email protected]>
Date:   Tue Nov 19 14:16:22 2019 -0700

    From Chunxi: The file fv_mapz.F90 also needs to be modified (K_warm)

commit f8a257a
Author: Man.Zhang <[email protected]>
Date:   Thu Nov 14 19:12:39 2019 -0700

    use upper-case CCPP

commit 77f4fba
Author: Man.Zhang <[email protected]>
Date:   Thu Nov 14 13:40:59 2019 -0700

     implement FA scheme water loading option if nwat =4

commit 9871607
Merge: ed75004 786447c
Author: Dom Heinzeller <[email protected]>
Date:   Tue Nov 5 06:59:34 2019 +0900

    Merge branch 'dev/emc' of https://github.com/NOAA-EMC/GFDL_atmos_cubed_sphere into HEAD

commit ed75004
Merge: 1d6035a f627bfb
Author: Dom Heinzeller <[email protected]>
Date:   Sat Oct 12 08:45:14 2019 +0900

    Merge pull request #4 from climbfuji/update_gmtb_develop_with_vlab_master_20191006

    Update NCAR gmtb/develop with NOAA-EMC dev/emc 2019/10/06

commit f627bfb
Author: Dom Heinzeller <[email protected]>
Date:   Mon Oct 7 12:12:24 2019 +0900

    Add missing change in fv_cmp.F90 - now identical with EMC code

commit e868186
Author: Dusan Jovic <[email protected]>
Date:   Tue Sep 24 01:57:11 2019 +0000

    change delz from positive value to the original value in the model

commit 672eb0e
Author: fanglin.yang <[email protected]>
Date:   Thu Sep 5 19:24:09 2019 +0000

        VLab Issue #68141

        modified:   docs/FV3_citations.bib
        modified:   model/fv_cmp.F90

        1) Add an option (namelist parameter: intqs) to use temperature instead of the liquid frozen
        temperature to calculate saturation mixing ratio in deriving GFDLMP PDF cloud cover.
        2) Add a literature reference.

commit 1d6035a
Merge: 94ab0e1 fec8205
Author: Dom Heinzeller <[email protected]>
Date:   Mon Sep 23 09:32:55 2019 -0600

    Merge pull request #2 from climbfuji/remove_transition_mode

    Remove TRANSITION mode

commit fec8205
Author: climbfuji <[email protected]>
Date:   Fri Sep 20 08:52:01 2019 -0600

    Remove TRANSITION mode

commit 94ab0e1
Author: Jun.Wang <[email protected]>
Date:   Mon Aug 26 21:03:55 2019 +0000

    add option to output omega

commit b700cae
Author: climbfuji <[email protected]>
Date:   Fri Aug 30 11:58:00 2019 -0600

    model/fv_dynamics.F90: replicating previous change to gmtb/develop branch of FV3, always allocate dtdt_m for IPD version

commit 3df1171
Author: Laurie Carson <[email protected]>
Date:   Fri Aug 16 10:46:56 2019 -0600

    Add codeowners for NCAR fork
aerorahul pushed a commit that referenced this pull request Jul 17, 2021
XiaqiongZhou-NOAA pushed a commit to XiaqiongZhou-NOAA/GFDL_atmos_cubed_sphere that referenced this pull request Sep 22, 2022
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3 participants