Update ngen-build Github Action to make sure 1.x numpy is used #2301
Workflow file for this run
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# Test changes that have been pushed to the master and dev branches | |
name: Testing and Validation | |
# Controls when the action will run. | |
on: | |
push: | |
branches: [ master, dev, notreal, release-* ] | |
pull_request: | |
branches: [ master, dev, notreal, release-* ] | |
workflow_dispatch: | |
env: | |
# Obtained from https://docs.github.com/en/actions/using-github-hosted-runners/about-github-hosted-runners#supported-runners-and-hardware-resources | |
# TODO: add something later that can check the runners for hyperthreading | |
LINUX_NUM_PROC_CORES: 2 | |
MACOS_NUM_PROC_CORES: 3 | |
ASAN_OPTIONS: detect_leaks=false | |
# A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
jobs: | |
# Run general unit tests in linux environment | |
test_unit: | |
# The type of runner that the job will run on | |
strategy: | |
matrix: | |
os: [ubuntu-22.04, macos-12] | |
fail-fast: false | |
runs-on: ${{ matrix.os }} | |
# Steps represent a sequence of tasks that will be executed as part of the job | |
steps: | |
- name: Checkout the commit | |
uses: actions/checkout@v4 | |
- name: Build Unit Tests | |
uses: ./.github/actions/ngen-build | |
with: | |
targets: "test_unit test_geopackage" | |
build-cores: ${{ env.LINUX_NUM_PROC_CORES }} | |
- name: Run Tests | |
run: ./cmake_build/test/test_unit | |
timeout-minutes: 15 | |
- name: Run GeoPackage Tests | |
run: | | |
# Container underflow report is a false positive, from a build with instrumentation | |
# disabled in one file where it hangs the compiler (ngen#567) | |
export ASAN_OPTIONS=${ASAN_OPTIONS}:detect_container_overflow=0 | |
./cmake_build/test/test_geopackage | |
timeout-minutes: 15 | |
- name: Clean Up | |
uses: ./.github/actions/clean-build | |
# Test PET | |
test_pet: | |
# The type of runner that the job will run on | |
strategy: | |
matrix: | |
os: [ubuntu-22.04, macos-12] | |
fail-fast: false | |
runs-on: ${{ matrix.os }} | |
# Steps represent a sequence of tasks that will be executed as part of the job | |
steps: | |
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
- uses: actions/checkout@v4 | |
- name: Build PET Tests | |
uses: ./.github/actions/ngen-build | |
with: | |
targets: "compare_pet" | |
bmi_c: on | |
build-cores: ${{ env.LINUX_NUM_PROC_CORES }} | |
- name: Run Tests | |
run: ./cmake_build/test/compare_pet | |
timeout-minutes: 15 | |
- name: Clean Up | |
uses: ./.github/actions/clean-build | |
# Test MPI remote nexus behavior in linux | |
test_mpi_remote_nexus: | |
# The type of runner that the job will run on | |
strategy: | |
matrix: | |
os: [ubuntu-22.04] | |
fail-fast: false | |
runs-on: ${{ matrix.os }} | |
# Steps represent a sequence of tasks that will be executed as part of the job | |
steps: | |
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
- uses: actions/checkout@v4 | |
- name: Build Unit Tests | |
uses: ./.github/actions/ngen-build | |
with: | |
targets: "test_remote_nexus" | |
build-cores: ${{ env.LINUX_NUM_PROC_CORES }} | |
use_mpi: 'ON' | |
- name: run_tests | |
run: mpirun --allow-run-as-root -np 2 ./cmake_build/test/test_remote_nexus | |
timeout-minutes: 15 | |
- name: Clean Up | |
uses: ./.github/actions/clean-build | |
# Run BMI C++ tests in linux environment | |
test_bmi_cpp: | |
# The type of runner that the job will run on | |
strategy: | |
matrix: | |
os: [ubuntu-22.04, macos-12] | |
fail-fast: false | |
runs-on: ${{ matrix.os }} | |
# Steps represent a sequence of tasks that will be executed as part of the job | |
steps: | |
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
- uses: actions/checkout@v4 | |
#make sure cxx bmi is initialized/ready | |
- uses: ./.github/actions/ngen-submod-build | |
with: | |
mod-dir: "extern/bmi-cxx/" | |
- name: Build Unit Tests | |
uses: ./.github/actions/ngen-build | |
with: | |
targets: "test_bmi_cpp" | |
build-cores: ${{ env.LINUX_NUM_PROC_CORES }} | |
- name: Run Tests | |
run: | | |
cd ./cmake_build/test/ | |
./test_bmi_cpp | |
cd ../../ | |
timeout-minutes: 15 | |
- name: Clean Up Unit Test Build | |
uses: ./.github/actions/clean-build | |
# Run BMI C tests in linux environment, and separating to isolate | |
test_bmi_c: | |
# The type of runner that the job will run on | |
strategy: | |
matrix: | |
os: [ubuntu-22.04, macos-12] | |
fail-fast: false | |
runs-on: ${{ matrix.os }} | |
# Steps represent a sequence of tasks that will be executed as part of the job | |
steps: | |
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
- uses: actions/checkout@v4 | |
- name: Build Unit Tests | |
uses: ./.github/actions/ngen-build | |
with: | |
targets: "test_bmi_c" | |
build-cores: ${{ env.LINUX_NUM_PROC_CORES }} | |
bmi_c: 'ON' | |
- name: run_bmi_c_tests | |
run: | | |
cd ./cmake_build/test/ | |
./test_bmi_c | |
cd ../../ | |
timeout-minutes: 15 | |
- name: Clean Up Unit Test Build | |
uses: ./.github/actions/clean-build | |
# As with the BMI C ubuntu job, separate Fortran in linux tests to keep setups clean and cause of failures clear. | |
test_bmi_fortran: | |
# The type of runner that the job will run on | |
strategy: | |
matrix: | |
os: [ubuntu-22.04, macos-12] | |
fail-fast: false | |
runs-on: ${{ matrix.os }} | |
# Steps represent a sequence of tasks that will be executed as part of the job | |
steps: | |
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
- uses: actions/checkout@v4 | |
- name: Build Unit Tests | |
uses: ./.github/actions/ngen-build | |
with: | |
targets: "test_bmi_fortran" | |
build-cores: ${{ env.LINUX_NUM_PROC_CORES }} | |
#is this required for this test? | |
bmi_c: 'ON' | |
bmi_fortran: 'ON' | |
- name: Run Unit Tests | |
run: | | |
cd ./cmake_build/test/ | |
./test_bmi_fortran | |
cd ../../ | |
timeout-minutes: 15 | |
- name: Clean Up Unit Test Build | |
uses: ./.github/actions/clean-build | |
# As with the BMI C ubuntu job, separate Python in linux tests to keep setups clean and cause of failures clear. | |
test_bmi_python: | |
# The type of runner that the job will run on | |
strategy: | |
matrix: | |
os: [ubuntu-22.04, macos-12] | |
fail-fast: false | |
runs-on: ${{ matrix.os }} | |
# Steps represent a sequence of tasks that will be executed as part of the job | |
steps: | |
# Checks-out repository under $GITHUB_WORKSPACE, so job can access it | |
- uses: actions/checkout@v4 | |
- name: Build Unit Tests | |
uses: ./.github/actions/ngen-build | |
with: | |
targets: "test_bmi_python" | |
build-cores: ${{ env.LINUX_NUM_PROC_CORES }} | |
#is this required for this test? | |
bmi_c: 'ON' | |
use_python: 'ON' | |
additional_python_requirements: 'extern/test_bmi_py/requirements.txt' | |
- name: run_bmi_python_tests | |
run: | | |
. .venv/bin/activate | |
cd ./cmake_build/ | |
./test/test_bmi_python | |
cd ../../ | |
timeout-minutes: 15 | |
- name: Clean Up Unit Test Build | |
uses: ./.github/actions/clean-build | |
# As with the BMI C ubuntu job, separate multi BMI in linux tests to keep setups clean and cause of failures clear. | |
test_bmi_multi: | |
# The type of runner that the job will run on | |
strategy: | |
matrix: | |
os: [ubuntu-22.04, macos-12] | |
fail-fast: false | |
runs-on: ${{ matrix.os }} | |
# Steps represent a sequence of tasks that will be executed as part of the job | |
steps: | |
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
- uses: actions/checkout@v4 | |
- name: Build Unit Tests | |
uses: ./.github/actions/ngen-build | |
with: | |
targets: "test_bmi_multi" | |
build-cores: ${{ env.LINUX_NUM_PROC_CORES }} | |
bmi_c: 'ON' | |
bmi_fortran: 'ON' | |
use_python: 'ON' | |
additional_python_requirements: 'extern/test_bmi_py/requirements.txt' | |
- name: Run Unit Tests | |
run: | | |
. .venv/bin/activate | |
./cmake_build/test/test_bmi_multi | |
timeout-minutes: 15 | |
- name: Clean Up Unit Test Build | |
uses: ./.github/actions/clean-build | |
# TODO: fails due to compilation error, at least in large part due to use of POSIX functions not supported on Windows. | |
# TODO: Need to determine whether Windows support (in particular, development environment support) is necessary. | |
# test_unit_windows_latest: | |
# # The type of runner that the job will run on | |
# runs-on: windows-latest | |
# | |
# # Steps represent a sequence of tasks that will be executed as part of the job | |
# steps: | |
# # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
# - uses: actions/checkout@v3 | |
# | |
# - name: git submodule | |
# run: git submodule update --init --recursive -- test/googletest | |
# | |
# - name: cmake_init_build | |
# run: cmake -B cmake_build -S . | |
# | |
# - name: build_tests | |
# run: cmake --build cmake_build --target test_unit | |
# timeout-minutes: 15 | |
# | |
# - name: run_tests | |
# run: ./cmake_build/test/test_unit | |
# timeout-minutes: 15 | |
# | |
# - name: clean_build | |
# run: cmake --build cmake_build --target clean | |
# | |
# - name: cleanup_dir | |
# run: rm -rf cmake_build |