Fix placement of constraints.txt in Action #1644
Workflow file for this run
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name: Module Integration Tests | |
# Controls when the action will run. | |
on: | |
push: | |
branches: [ master, dev, notreal, release-* ] | |
pull_request: | |
branches: [ master, dev, notreal, release-* ] | |
workflow_dispatch: | |
env: | |
# Obtained from https://docs.github.com/en/actions/using-github-hosted-runners/about-github-hosted-runners#supported-runners-and-hardware-resources | |
# TODO: add something later that can check the runners for hyperthreading | |
LINUX_NUM_PROC_CORES: 2 | |
MACOS_NUM_PROC_CORES: 3 | |
ASAN_OPTIONS: detect_leaks=false | |
# A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
jobs: | |
# Run general unit tests in linux environment | |
test_surfacebmi_plus_cfe: | |
# The type of runner that the job will run on | |
strategy: | |
matrix: | |
os: [ubuntu-22.04, macos-12] | |
fail-fast: false | |
runs-on: ${{ matrix.os }} | |
# Steps represent a sequence of tasks that will be executed as part of the job | |
steps: | |
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
- uses: actions/checkout@v3 | |
- name: Build NGen | |
uses: ./.github/actions/ngen-build | |
with: | |
targets: "ngen" | |
build-cores: ${{ env.LINUX_NUM_PROC_CORES }} | |
bmi_c: 'ON' | |
bmi_fortran: 'ON' | |
timeout-minutes: 15 | |
- name: Run surfacebmi plus cfebmi | |
run: | | |
inputfile='data/example_bmi_multi_realization_config.json' | |
./cmake_build/ngen || true | |
./cmake_build/ngen data/catchment_data.geojson "cat-27" data/nexus_data.geojson "nex-26" $inputfile | |
- name: Run surfacebmi, cfebmi and petbmi | |
run: | | |
inputfile='data/example_bmi_multi_realization_config_w_noah_pet_cfe.json' | |
./cmake_build/ngen || true | |
./cmake_build/ngen data/catchment_data.geojson "cat-27" data/nexus_data.geojson "nex-26" $inputfile | |
# Run t-route/pybind integration test | |
test_troute_integration: | |
# The type of runner that the job will run on | |
strategy: | |
matrix: | |
os: [ubuntu-22.04] # [ubuntu-latest, macos-12] #TODO: Fix #505 | |
fail-fast: false | |
runs-on: ${{ matrix.os }} | |
# Steps represent a sequence of tasks that will be executed as part of the job | |
steps: | |
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
- uses: actions/checkout@v3 | |
- name: Build Ngen | |
uses: ./.github/actions/ngen-build | |
with: | |
targets: "test_routing_pybind" | |
build-cores: ${{ env.LINUX_NUM_PROC_CORES }} | |
#is this required for this test? | |
use_python: 'ON' | |
use_troute: 'ON' | |
timeout-minutes: 15 | |
# Disabling this cache for the time being for a few reasons | |
# 1) t-route build/install can be tricky without pre-cythonized sources | |
# 2) may not want to use a cached version of t-route if we are testing its integration | |
# we want to use the latest code in the repo and make sure it works...a cached version | |
# wouldn't be good for that... | |
#- name: Cache troute dependency | |
# id: cache-linux-troute-dep | |
# uses: actions/cache@v1 | |
# with: | |
# path: .venv | |
# key: linux-troute-dep-fixed | |
- name: Checkout t-route (latest master) | |
uses: actions/checkout@v3 | |
with: | |
repository: NOAA-OWP/t-route | |
path: t-route | |
#This step should come after ngen build??? | |
- name: Configure Fortran Compiler | |
run: | | |
if [ ${{ runner.os }} == 'macOS' ] | |
then | |
sudo ln -s $(which gfortran-11) $(dirname $(which gfortran-11))/gfortran | |
export FC=gfortran-11 | |
export F90=gfortran-11 | |
fi | |
- name: Build T-route Dependency | |
#if: steps.cache-linux-troute-dep.outputs.cache-hit != 'true' | |
#MacOS pybind has issues with egg links, so install all packages without egg links on that os | |
run: | | |
python3 -m venv .venv | |
. .venv/bin/activate | |
cd t-route | |
pip install 'pip>=23.0,<23.1' | |
pip install -U setuptools | |
pip install -r requirements.txt | |
pip install deprecated 'pyarrow==11.0.0' tables geopandas numpy | |
if [ ${{ runner.os }} == 'macOS' ] | |
then | |
export LIBRARY_PATH=/usr/local/lib/gcc/11/ | |
export LD_LIBRARY_PATH=/usr/local/lib/gcc/11/ | |
fi | |
export NETCDFALTERNATIVE=${NETCDF}/include | |
export FC=gfortran | |
export F90=gfortran | |
./compiler.sh no-e | |
deactivate | |
- name: Run test | |
run: | | |
. .venv/bin/activate | |
./cmake_build/test/test_routing_pybind | |
deactivate |