BUG: fix bug with DWI ADC images not removed by ADNI to BIDS (aramis-…

…lab#1061)
NicolasGensollen · Feb 1, 2024 · 465ad58 · 465ad58
1 parent 2f160fb
commit 465ad58
Showing 1 changed file with 6 additions and 1 deletion.
diff --git a/clinica/iotools/converters/adni_to_bids/adni_utils.py b/clinica/iotools/converters/adni_to_bids/adni_utils.py
@@ -1464,7 +1464,12 @@ def create_file(
         # Removing images with unsupported suffixes if generated by dcm2niix
         for suffix in ("ADC", "real", "imaginary"):
             file_with_bad_suffix = output_path / f"{output_filename}_{suffix}"
-            if file_with_bad_suffix.with_suffix(".nii").exists():
+            if any(
+                [
+                    file_with_bad_suffix.with_suffix(s).exists()
+                    for s in (".nii", ".nii.gz")
+                ]
+            ):
                 cprint(
                     f"Image with bad suffix {suffix} was generated by dcm2niix "
                     f"for subject {subject} and session {session} : "