Link Snakemake to otoole config file #143
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| name: Python build | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| # os: [ubuntu-latest, macos-latest] | |
| os: [ubuntu-latest] | |
| python-version: ["3.9", "3.10", "3.11"] | |
| steps: | |
| - name: checkout repo | |
| uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install cartopy dependencies | |
| run: sudo apt-get -y install libgeos-dev | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install tox | |
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| pip install -e . | |
| - name: Test with pytest | |
| run: | | |
| tox |