Merge pull request #47 from swryan/om331 #9
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # Run CADRE Tests | |
| name: CADRE Tests | |
| on: | |
| # Trigger on push or pull request events for the master branch | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| # Allow running the workflow manually from the Actions tab | |
| workflow_dispatch: | |
| jobs: | |
| CADRE_tests: | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 120 | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: Display run details | |
| run: | | |
| echo "=============================================================" | |
| echo "Run #${GITHUB_RUN_NUMBER}" | |
| echo "Run ID: ${GITHUB_RUN_ID}" | |
| echo "Testing: ${GITHUB_REPOSITORY}" | |
| echo "Triggered by: ${GITHUB_EVENT_NAME}" | |
| echo "Initiated by: ${GITHUB_ACTOR}" | |
| echo "=============================================================" | |
| - name: Checkout code | |
| uses: actions/checkout@v3 | |
| - name: Setup conda | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| python-version: 3.11 | |
| conda-version: "*" | |
| channels: conda-forge,defaults | |
| channel-priority: true | |
| - name: Create Environment | |
| run: | | |
| conda install numpy=1.23 scipy -q -y | |
| python -m pip install --upgrade pip | |
| python -m pip install six parameterized | |
| python -m pip install openmdao[test] | |
| python -m pip install . | |
| pip install git+https://github.com/OpenMDAO/MBI | |
| - name: Install PETSc | |
| run: | | |
| conda install mpi4py petsc4py -q -y | |
| echo "=============================================================" | |
| echo "Check MPI and PETSc installation" | |
| echo "=============================================================" | |
| export OMPI_MCA_rmaps_base_oversubscribe=1 | |
| echo "-----------------------" | |
| echo "Quick test of mpi4py:" | |
| mpirun -n 3 python -c "from mpi4py import MPI; print(f'Rank: {MPI.COMM_WORLD.rank}')" | |
| echo "-----------------------" | |
| echo "Quick test of petsc4py:" | |
| mpirun -n 3 python -c "import numpy; from mpi4py import MPI; comm = MPI.COMM_WORLD; \ | |
| import petsc4py; petsc4py.init(); \ | |
| x = petsc4py.PETSc.Vec().createWithArray(numpy.ones(5)*comm.rank, comm=comm); \ | |
| print(x.getArray())" | |
| echo "-----------------------" | |
| echo "OMPI_MCA_rmaps_base_oversubscribe=1" >> $GITHUB_ENV | |
| echo "Workaround for intermittent failures with OMPI https://github.com/open-mpi/ompi/issues/7393" | |
| echo "TMPDIR=/tmp" >> $GITHUB_ENV | |
| - name: Display environment info | |
| run: | | |
| conda info | |
| conda list | |
| - name: Run tests | |
| run: | | |
| echo "=============================================================" | |
| echo "Run tests (from directory other than repo root)" | |
| echo "=============================================================" | |
| cd $HOME | |
| testflo -n 1 CADRE --timeout=120 --show_skipped --coverage --coverpkg CADRE | |
| - name: Submit coverage | |
| env: | |
| COVERALLS_REPO_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| COVERALLS_SERVICE_NAME: "github" | |
| COVERALLS_PARALLEL: true | |
| run: | | |
| echo "=============================================================" | |
| echo "Submit coverage" | |
| echo "=============================================================" | |
| cd $HOME | |
| python -m pip install coveralls | |
| SITE_DIR=`python -c 'import site; print(site.getsitepackages()[-1])'` | |
| coveralls --basedir $SITE_DIR | |
| coveralls: | |
| name: Finish coverage | |
| needs: [CADRE_tests] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: coverallsapp/github-action@master | |
| with: | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| parallel-finished: true |