Adding plot coverage option to run usage

OpenOmics · Jun 6, 2024 · afa702c · afa702c
1 parent 84f92f5
commit afa702c
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/docs/usage/run.md b/docs/usage/run.md
@@ -18,6 +18,7 @@ $ mpox-seek run [--help] \
       [--additional-strains ADDITIONAL_STRAINS] \
       [--batch-id BATCH_ID] \
       [--bootstrap-trees] \
+      [--plot-coverage] \
       --input INPUT [INPUT ...] \
       --output OUTPUT
 ```