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Fix test on macos

Fix test on macos #23

Workflow file for this run

name: Continuous build using OMV
on:
push:
branches: [ master, development, experimental, test* ]
pull_request:
branches: [ master, development, experimental, test* ]
jobs:
build:
runs-on: ${{ matrix.runs-on }}
strategy:
fail-fast: false
matrix:
python-version: [ 3.9 ]
engine: [ jNeuroML, jNeuroML_NEURON, jNeuroML_validate, jNeuroML_validatev1, "NEURON:8.1", "NEURON:8.2.2" ]
runs-on: [ubuntu-latest, macos-latest]
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install HDF5 for pytables on macos-latest
if: ${{ matrix.runs-on == 'macos-latest' }}
run: |
brew install hdf5
- name: Install OMV
run: |
pip install git+https://github.com/OpenSourceBrain/osb-model-validation
pip install scipy sympy matplotlib cython pandas tables
- name: Run OMV tests on engine ${{ matrix.engine }}
run: |
omv all -V --engine=${{ matrix.engine }}
- name: OMV final version info
run: |
omv list -V # list installed engines
env