Use pip install for netpyne #292
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| name: Continuous builds | |
| on: | |
| schedule: | |
| - cron: "1 1 1 */1 *" # Run once a month to test... | |
| push: | |
| branches: [ master, development, test_* ] | |
| pull_request: | |
| branches: [ master, development, test_* ] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: [ 3.9 ] | |
| engine: | |
| - Arbor | |
| - "Brian2:2.4" | |
| - Brian2 | |
| - EDEN | |
| - "NEST:2.20.0" | |
| - "NEST:3.3" | |
| - PyNEST | |
| - PyNEST:2.20.0 | |
| - PyNEST:3.1 | |
| - "NEURON:7.8.2" | |
| - "PyNEURON:8.0.2" | |
| - PyNN | |
| - PyNN_Brian2 | |
| - PyNN_NEURON | |
| - PyNN_Nest | |
| - PyNN_NeuroML | |
| - NetPyNE | |
| - PyLEMS | |
| - PyLEMS_NeuroML2 | |
| - jLEMS | |
| - "jNeuroML:v0.12.2" | |
| - jNeuroML_Brian2 | |
| - jNeuroML_EDEN | |
| - "jNeuroML_NEURON:8.2.1" | |
| - jNeuroML_NetPyNE | |
| - jNeuroML_PyNN_NEURON | |
| - jNeuroML_validate | |
| - jNeuroML_validatev1 | |
| - Py_neuroConstruct | |
| - pyNeuroML | |
| - jNeuroML_Moose | |
| - MOOSE | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install OMV | |
| run: | | |
| pip install . | |
| pip install scipy sympy matplotlib cython pandas tables | |
| pip install 'numpy<=1.23.0' # temp fix for https://levelup.gitconnected.com/fix-attributeerror-module-numpy-has-no-attribute-float-d7d68c5a4971 | |
| #sudo apt install octave | |
| - name: Run OMV tests on engine ${{ matrix.engine }} | |
| run: | | |
| # Not yet checked: Octave, genesis | |
| omv all -V --engine=${{ matrix.engine }} | |
| - name: OMV final version info | |
| run: | | |
| omv list -V # list installed engines | |
| env | |
| pip list |