updating tests and removal of non-ASCII. #33
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on: | |
push: | |
branches: | |
- master | |
pull_request: | |
branches: | |
- master | |
name: R-CMD-check | |
jobs: | |
R-CMD-check: | |
runs-on: ${{ matrix.config.os }} | |
name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
strategy: | |
fail-fast: false | |
matrix: | |
config: | |
- {os: macOS-latest, r: 'release'} | |
env: | |
ACTIONS_ALLOW_UNSECURE_COMMANDS: true | |
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
RSPM: ${{ matrix.config.rspm }} | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
steps: | |
- uses: actions/checkout@v2 | |
# Install libomp via Homebrew | |
- name: Install libomp via Homebrew | |
run: | | |
brew install libomp | |
- name: Find and set DYLD_LIBRARY_PATH | |
run: | | |
export DYLD_LIBRARY_PATH=$(brew --prefix libomp)/lib | |
echo "DYLD_LIBRARY_PATH is set to $DYLD_LIBRARY_PATH" | |
shell: bash | |
- name: Set global environment variable for DYLD_LIBRARY_PATH | |
run: | | |
echo "DYLD_LIBRARY_PATH=$(brew --prefix libomp)/lib" >> $GITHUB_ENV | |
shell: bash | |
- uses: r-lib/actions/setup-r@v2-branch | |
with: | |
r-version: ${{ matrix.config.r }} | |
http-user-agent: ${{ matrix.config.http-user-agent }} | |
- uses: r-lib/actions/setup-pandoc@v2-branch | |
- uses: conda-incubator/setup-miniconda@v3 | |
with: | |
auto-update-conda: true | |
python-version: 3.9 | |
miniconda-version: "latest" | |
- name: Configure Conda (set default channel and solver) | |
run: | | |
conda config --add channels defaults | |
conda config --set solver classic | |
- name: Install numpy via Conda | |
run: conda install -c conda-forge numpy | |
- name: Query dependencies | |
run: | | |
install.packages('remotes') | |
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | |
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") | |
shell: Rscript {0} | |
- name: Cache R packages | |
if: runner.os != 'Windows' | |
uses: actions/cache@v1 | |
with: | |
path: ${{ env.R_LIBS_USER }} | |
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | |
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | |
- name: Install system dependencies | |
if: runner.os == 'Linux' | |
run: | | |
while read -r cmd | |
do | |
eval sudo $cmd | |
done < <(Rscript -e 'cat(remotes::system_requirements("ubuntu", "20.04"), sep = "\n")') | |
sudo apt install libharfbuzz-dev | |
sudo apt install libfribidi-dev | |
- name: Install dependencies | |
run: | | |
remotes::install_deps(dependencies = TRUE) | |
remotes::install_cran("rcmdcheck") | |
shell: Rscript {0} | |
- name: Fix Conda permissions on macOS (SUDO) | |
if: runner.os == 'macOS' | |
run: sudo chown -R $UID $CONDA | |
- name: Installing text and testing it | |
run: | | |
install.packages("devtools") | |
library(devtools) | |
devtools::install_github("oscarkjell/text") | |
text::textrpp_install(prompt = FALSE) | |
text::textrpp_initialize(textEmbed_test = TRUE) | |
shell: Rscript {0} | |
- name: Session info | |
run: | | |
options(width = 100) | |
pkgs <- installed.packages()[, "Package"] | |
sessioninfo::session_info(pkgs, include_base = TRUE) | |
shell: Rscript {0} | |
- name: Check | |
env: | |
_R_CHECK_CRAN_INCOMING_: false | |
OMP_MAX_ACTIVE_LEVELS: 2 | |
run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check") | |
shell: Rscript {0} | |
- name: Show testthat output | |
if: always() | |
run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true | |
shell: bash |